CI01000013_08107786_08113703


Basic Information

Item Value
gene id CI01000013_08107786_08113703
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 8106676 ~ 8113731 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_08107786_08113703.mRNA
CTATAAAAATAGATGAAACCAATGATATAATGTTGCAACCTTTTCTATTTGCTTAGCATTTTTATTTAATGTATAAAGCCAAATTTAAAGGACTGAATTTATGCTGCCGGTAAAAAGTCTGTGAAAGGTCACTGAAGAAACTGAACTTTGACTGGTCATGTCTTTTCTCGTCGTTAATGGAACCGGAATCAGTCTCCTTCACCGTCACAGTGATTTATTTTCGTGTAATTCCATTTACTGGCCACTAGGCGTCCTACACAACACAACACACACTGGTGTGTTGCTTAGCGTTACTAAAACGAGTTGTTGAAACCAAAAATATTCACAAGGCTTACTTTACAACTTTAAAAGTCATTACCAGAAATCATATGCACTTTAAAAGGATTAAGACTGTAACTATTTGAAGCGTTAGCATATATCATATCAAAAACACGTTTCACAATAAGTTTTTTAACTGTTTTTGCTTTGTTTATTAGCATCAAAACGCAATATTTTGAACCGCTCACTCTGTAACGACAACGCAAAATTACTTTTGGGGACAACTGGTTAGAAAAGTTGTCAATCCCGTCCACATTTCCGCTACGTGCACCCCCTCCACCTCCAATCCCTCCCATTTCCAACCACTTGCTTTTCCAGCTGCTTTGAGGTCAGTCAGAATCCGTGAAACTGTCCGGCGATCAGTCACACGGACGCGAGGAAAGGGTGCTGAAAATCACGCTAGCCCTGTGTAACATGTCATTATGCTGCTCTGTCTGTCCAGATCCGTCGGCGGGTGACTAAAAGACAGCTTGAAGGGTTGGATTGCCTCTTGCTGAAACAAGCTGTGGACATTTGCCCAAGGAAAGGGTTACTTGTTTGGGAGGAAACTCTTCCAGTGCGCGCTCTGTTTTGATAGCATTGACGGCGGAATTACAATCGGAATCGTTCGGAGCTCGGACGATGAACATTTGCGGCGTTTGGGTTTTGGGATTTTCAGCCTGAGCAACTTGAAATATCTCTGGGATGCACTTGCCTCTATAGGACGACCTGGAAATTGAAAAAGCCCCAACATAAGCCCGTTTACAAACATTCTCACAACTGAACTATTGATATTTCTATTCACTATTGAAAATGTCGAATCCTCTGAAGTTTAAAAAGGAAAAAGAGATCATTACAGATTACGAGACTCAAGTCAAAGTTGGCGTTCTTTTGATTGCACCAGGTCACGACTCACTGGCCTGCCCCTGCTGGCTCCTGACATGGACGCTGTCCTCAACCTGTCAGAGAATATTTCCCCCATAAATGTTATAACCTCTAACGCATCTTCCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_08107786_08113703.mRNA True 1309 mRNA 0.42 2 8106676 8113731

Neighbor

gene id symbol gene type direction distance location
CI01000013_08101166_08105054 TMEM5 coding upstream 1462 8101166 ~ 8105214 (+)
CI01000013_08095012_08097899 CS012 coding upstream 8143 8095012 ~ 8098533 (+)
CI01000013_08066408_08071727 KLHL36 coding upstream 34704 8065209 ~ 8071972 (+)
CI01000013_08013515_08013676 NA coding upstream 91910 8013515 ~ 8014766 (+)
CI01000013_07970614_07989626 CMIP coding upstream 116920 7970614 ~ 7989756 (+)
CI01000013_08139954_08212837 SRGAP1A, SRGAP1 coding downstream 26223 8139954 ~ 8212837 (+)
CI01000013_08216673_08226743 PARP12A, PARP12 coding downstream 102868 8216599 ~ 8227774 (+)
CI01000013_08336335_08399543 HIPK2 coding downstream 222604 8336335 ~ 8399621 (+)
CI01000013_08402498_08414755 NA coding downstream 288071 8401802 ~ 8416190 (+)
CI01000013_08448494_08481411 NA coding downstream 333544 8447275 ~ 8482911 (+)
G82178 NA non-coding upstream 19660 8083578 ~ 8087016 (+)
G82184 NA non-coding upstream 29374 8074660 ~ 8077302 (+)
G82146 NA non-coding upstream 46851 8011261 ~ 8059825 (+)
G82157 NA non-coding upstream 90310 8015253 ~ 8016366 (+)
G82339 NA non-coding upstream 153680 7952768 ~ 7952996 (+)
G82162 NA non-coding downstream 114996 8228727 ~ 8230128 (+)
G82155 NA non-coding downstream 138982 8252713 ~ 8305402 (+)
CI01000013_08652173_08660558 NA non-coding downstream 495293 8652173 ~ 8661156 (+)
G82453 NA non-coding downstream 586885 8700616 ~ 8700839 (+)
G82503 NA non-coding downstream 720341 8834072 ~ 8846060 (+)
G82168 NA other upstream 65333 8028338 ~ 8041343 (+)
G81994 NA other upstream 768437 7335945 ~ 7338239 (+)
CI01000013_06076169_06080164 NA other upstream 2024309 6075400 ~ 6081684 (+)
CI01000013_06050285_06059640 NA other upstream 2047180 6049864 ~ 6060269 (+)
G80845 NA other upstream 3270444 4835078 ~ 4836232 (+)
G82581 NA other downstream 1215598 9329329 ~ 9334948 (+)
G84005 NA other downstream 1487880 9601611 ~ 9602235 (+)
G84194 NA other downstream 1916877 10030608 ~ 10036953 (+)
G84215 NA other downstream 1962723 10076454 ~ 10079336 (+)
G84250 NA other downstream 2101396 10215127 ~ 10215962 (+)

Expression


Co-expression Network