CI01000013_08013515_08013676


Basic Information

Item Value
gene id CI01000013_08013515_08013676
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 8013515 ~ 8014766 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_08013515_08013676.mRNA
ATGACGTCTAGTGGTTATTCTCCAGACCAGGTCTTGAGAAAAATCGCTTCCTGTGGCATAAGCAGCTTTCTAATTTCCTATGATGAAAAGCAAGCATTTCCAGAGGACAAGAGAGAGAGAAAAATCCCCCAAATCATCTTCATGGAGATGAGTTACCTGTGAATTGATTTAAATGAAAATATTAAGTAAATACCTGTATTAATGATACCACAGGCCTCCAAACCAATATTTAGAAAGCTCAATCTCAGATAAAAAGCTCAACTCTTTCAAGCAGAAATTGAGAATCATGTAAGATAGACAGTGGCACGGACACTGTTTTAAAACAAGGGGGTGGAGAAAAATATAAAGAATTGGTGAAAAGAAGTGGATTTTACTGGAAGGAGAGAGATTGTGTGAGAGATATGTCTGATGTGCAATTTTCTCAGCTTAACAGTTCTCACGAAATACCCTTTTATAAGTCTTTAGGTTTCTAGGTCTTGAAAATTTGTTTTCGCAGCACCAGAAAATAAGTTACAAGTTACAGAAACTTAGTTATAATAATCATACTTTATTTGTTCATGTATTAAAAGCATCCATTTAAATTGTTTTATTAAAGATTTTAAAGAATCACGTAAAACAGTTTTAATTTAGTATCAAGATCATTTTCGTTTTAGTAATTTGGGGGGGGGGGGGTTGCCATTTTTGTTAGGTTTACTATATAGTTATGAATTTGTATTTCAGTTTTAGTTATTTTAGTACATCAATTAAGTGAGAAATTAAATGAGAAATGTTTAATGTTTAAAATAAAGGTTTTTAAATTTGATTTTATTTCCGTTAAAATTGTATTTTATTTCAAGCAATGAAAATGTTTTTATTTTTTACTTTTAGTTTTGTTAACTATAATAACCCTGCAAGAGAGAGAGAGAGTGAAAACACTTGTTTGTTTCTGCTCCTAAATTAGAATCATATGAAGATACAGTATTTGTTCCAGATATTTGTTGATAAACCTTAAAGTGAAAGTTCCTAATTTTATGTTACAGCTCACTGGGGTCGTCTGGCTCACTGGGGGTTTGTACGGCACTATATGGTACTATACAAATTTAAATTTAAATTAAAAAAAAAAAAAAAAAAAAACCCTATTCCTCCCCAGACAAACACTATTTTTTAATACTGTAATGTTCTGATTGGCCATTCAGCCTCAATGGAAGAATACAGCAAAGCTGTCTAGGAAATTGCATAATGTAAATGTCAAACGGTCTGCTCAGTTGCAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_08013515_08013676.mRNA True 1252 mRNA 0.32 1 8013515 8014766

Neighbor

gene id symbol gene type direction distance location
CI01000013_07970614_07989626 CMIP coding upstream 23759 7970614 ~ 7989756 (+)
CI01000013_07929832_07935997 GAN coding upstream 77518 7929832 ~ 7935997 (+)
CI01000013_07791141_07802608 NA coding upstream 210805 7790704 ~ 7802710 (+)
CI01000013_07765924_07780475 NA coding upstream 232799 7764685 ~ 7780716 (+)
CI01000013_07375912_07390782 MLYCD coding upstream 622512 7373818 ~ 7391003 (+)
CI01000013_08066408_08071727 KLHL36 coding downstream 50443 8065209 ~ 8071972 (+)
CI01000013_08095012_08097899 CS012 coding downstream 80246 8095012 ~ 8098533 (+)
CI01000013_08101166_08105054 TMEM5 coding downstream 86400 8101166 ~ 8105214 (+)
CI01000013_08107786_08113703 NA coding downstream 91910 8106676 ~ 8113731 (+)
CI01000013_08139954_08212837 SRGAP1A, SRGAP1 coding downstream 125188 8139954 ~ 8212837 (+)
G82339 NA non-coding upstream 60519 7952768 ~ 7952996 (+)
G82338 NA non-coding upstream 60860 7952441 ~ 7952655 (+)
G82337 NA non-coding upstream 61247 7951851 ~ 7952268 (+)
G82286 NA non-coding upstream 191504 7821700 ~ 7822011 (+)
G82079 NA non-coding upstream 207969 7661091 ~ 7805546 (+)
G82157 NA non-coding downstream 487 8015253 ~ 8016366 (+)
G82184 NA non-coding downstream 59894 8074660 ~ 8077302 (+)
G82178 NA non-coding downstream 68812 8083578 ~ 8087016 (+)
G82162 NA non-coding downstream 213961 8228727 ~ 8230128 (+)
G82155 NA non-coding downstream 237947 8252713 ~ 8305402 (+)
G81994 NA other upstream 675276 7335945 ~ 7338239 (+)
CI01000013_06076169_06080164 NA other upstream 1931148 6075400 ~ 6081684 (+)
CI01000013_06050285_06059640 NA other upstream 1954019 6049864 ~ 6060269 (+)
G80845 NA other upstream 3177283 4835078 ~ 4836232 (+)
CI01000013_04051081_04064651 NA other upstream 3947686 4050837 ~ 4065829 (+)
G82168 NA other downstream 13572 8028338 ~ 8041343 (+)
G82581 NA other downstream 1314563 9329329 ~ 9334948 (+)
G84005 NA other downstream 1586845 9601611 ~ 9602235 (+)
G84194 NA other downstream 2015842 10030608 ~ 10036953 (+)
G84215 NA other downstream 2061688 10076454 ~ 10079336 (+)

Expression


Co-expression Network