CI01000013_12425691_12435347 (SERPINI1, NEUS)


Basic Information

Item Value
gene id CI01000013_12425691_12435347
gene name SERPINI1, NEUS
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 12425590 ~ 12435347 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_12425691_12435347.mRNA
ATGGCACAAGGCCATGTTCTCCCCTGCATTCTTTGTTTGTGTGGAAAACACTGTTGCCACGCAACGACTAAAGCTGGGAGACTGTGCCATAGTAGGATGAAGGTAGAGCTGTATCTGTGCATATGTGAGGGTGAATCTCATCCCTCGTTTACCATGTTGCTGCTCGGACTCTTGCCGCTGATGTTGCTACGGGGGTGTGGTTGCCAGGCGGCAGACGTTCCCGAGGATGTGACGGCAGAGTTCTCGGTCAGACTTTACCACCAGCTCCAGATCACAGGGGGAGAAGAGAACATCATCTTCTCCCCGCTGAGCGTGGCTCTGGCTCTGGGCATGGTGGAGCTGGGCGCCCGCGGCTCTTCTTTAGAGGAGATCAGACAGGCCGTGGGCTACAGTCATTTCAGAGAAGATGAGGAGTTCTCTCTGCTGAGCAACCTGACCCAGGCCCTGTCCACAGATGAAGAGCAGTATGTGGTCCGGCTGGCCAACTCCCTCTTTCTGCAGAGGGGGGTTCACTTCAATGAGGACTTCCTGCAGCTCATGAAAAAGTACTTCAAAGCAGAGGTGGAGACGGTGGACTTCAGCGAGTCAGCAGCCGTGGCTGAACGCATCAACTCTTGGGTGCTGAACCACACGGAGAGCAAAATCCACAACCTGGTGTCTGCGGACGACTTCAGCAGCTCCACCATGATCATGTTAGTAAACGCTGTGTACTTCAGGGGCAGCTGGAAGAACCAGTTCAGACCAGAAAACACCAGAACCTTCTCCTTCACCAAGGATGACGGCAGTGAAGTTCAGACCTTGATGATGTACCAGCAGGGAGAATTCTACTACGGAGAGTTCAGCGATGGCACCACAGAGGCGGGTGGAGTGTACCAGGTCCTGGAGATGCTTTATGAAGGTGAAGACATGAGCATGATGATCGTTCTGCCCCGTCAGGAGGTTCCTCTGGCCACCCTGGAGCCTATCATCAAAGCCCAGCTGCTGGAGGAGTGGGCCAACAACGTCAAGAGGCAAAAGGTGGAGGTCTACCTTCCCAGATTCAAGGTGGAACAAAAGATTGATCTGAGAGACACACTGCAGCAGCTGGGCATCAAGAACATCTTCACCAAAGATGCCGATCTGTCAGCCATGACAGCCGAGGTGACAGATGGACAGGATCTGTTTATCGGGAAGGCTGTACAGAAGGCTTACCTGGAGGTAACGGAGGAAGGAGCCGAGGGGGCGGCAGGATCAGTAAATTGCTTTGAGAATCTTGTACATTCAGACAAGCTAAAAGCGCCCCCTCCTGTTCAACTCTTGTCTTTTTAATTAAGGTTTATAAAAGGTTGACTGAGTCATCATGTAGTATTGGTTAAATCCTTTTAATATTAGTTTTTATATATCAGTTCTATATTGATGTCAAAAATAAA

Function

symbol description
serpini1 Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to be involved in negative regulation of endopeptidase activity. Predicted to be active in extracellular space. Is expressed in hypothalamus; lapillus; midbrain; otolith; and telencephalon. Human ortholog(s) of this gene implicated in familial encephalopathy with neuroserpin inclusion bodies. Orthologous to human SERPINI1 (serpin family I member 1).
neus poly-alpha-2,8 sialosyl sialyltransferase

GO:

id name namespace
GO:0005615 extracellular space cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_12425691_12435347.mRNA True 1409 mRNA 0.51 8 12425590 12435347

Neighbor

gene id symbol gene type direction distance location
CI01000013_12410747_12418599 NA coding downstream 6991 12410569 ~ 12418599 (-)
CI01000013_12365448_12375915 NA coding downstream 49675 12364884 ~ 12375915 (-)
CI01000013_12340516_12350128 NA coding downstream 75454 12340444 ~ 12350136 (-)
CI01000013_12327420_12330914 NA coding downstream 94646 12327086 ~ 12330944 (-)
CI01000013_12284334_12294513 ZDHHC7 coding downstream 131077 12283582 ~ 12294513 (-)
G85787 NA non-coding downstream 29190 12395741 ~ 12396400 (-)
G85815 NA non-coding downstream 50896 12299130 ~ 12374694 (-)
G85812 NA non-coding downstream 146066 12279137 ~ 12279524 (-)
G85811 NA non-coding downstream 148151 12277099 ~ 12277439 (-)
G85790 NA non-coding downstream 149731 12272630 ~ 12275859 (-)
CI01000013_11596784_11604320 NA other downstream 824334 11596688 ~ 11604865 (-)
G85401 NA other downstream 1390124 11035032 ~ 11035466 (-)
G85188 NA other downstream 1830253 10592204 ~ 10595337 (-)
CI01000013_10564288_10569141 NA other downstream 1853150 10563459 ~ 10569290 (-)
G85170 NA other downstream 1944890 10479861 ~ 10480700 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_012545 serpini1 coding NC_007129.7 CM002902.2 5137241 ~ 5170417 (+)