G78579



Basic Information


Item Value
gene id G78579
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 899551 ~ 899907 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU89529
CAACGTCGGCCGGAGTGACTGCGGTTACGTCCACTGAGTGGCAAAAAGACTTAGACAGCATTGATTTTCAACGTGAATGCTGCGGAAAAACACATCCAAAACGGGAAAGAGCTGTGCGATTGACTGTACAAATTAATTTTACAAGAAATCTGAGGTAAATTTTTAAAGACTGCCGAAAGCTACAGAAAAGAGAAGCAAATGGATCGCTGCAATTCACAGAAACAACTGGACCCCAGGCAGCGAAACGTGGATTTGCAGTTATCGTTTTGTGTCAATATGTTGAATTTTGGGGTAAAATCATACCGTATATATTGTATTTTCATGTATTATTGTATTGACAACTCCTCAAATATTTAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU89529 True 357 lncRNA 0.39 1 899551 899907

Neighbor


gene id symbol gene type direction distance location
CI01000013_00873450_00880028 ZNF710A, ZNF710 coding downstream 19509 873228 ~ 880042 (-)
CI01000013_00857066_00859084 NA coding downstream 40347 856711 ~ 859204 (-)
CI01000013_00717175_00764059 RASGRF1 coding downstream 135492 717175 ~ 764059 (-)
CI01000013_00711849_00714655 CTSH coding downstream 184462 711496 ~ 715089 (-)
CI01000013_00698283_00710200 BLM coding downstream 188500 698283 ~ 711051 (-)
CI01000013_00971329_00971942 NA coding upstream 70606 970513 ~ 972335 (-)
CI01000013_01029597_01029830 NA coding upstream 129632 1029539 ~ 1029830 (-)
CI01000013_01054174_01110208 FKBP16 coding upstream 154230 1054137 ~ 1110466 (-)
CI01000013_01168439_01172788 PEX11A coding upstream 267827 1167734 ~ 1174268 (-)
CI01000013_01297354_01298578 NA coding upstream 397422 1297329 ~ 1298578 (-)
G78575 NA non-coding downstream 6632 892658 ~ 892919 (-)
G78574 NA non-coding downstream 7309 892023 ~ 892242 (-)
G78570 NA non-coding downstream 13531 885820 ~ 886020 (-)
G78553 NA non-coding downstream 60564 838652 ~ 838987 (-)
G78535 NA non-coding downstream 105042 794186 ~ 794509 (-)
G78588 NA non-coding upstream 42552 942459 ~ 942694 (-)
G78601 NA non-coding upstream 66216 966123 ~ 966337 (-)
G78602 NA non-coding upstream 67697 967604 ~ 967813 (-)
G78603 NA non-coding upstream 68158 968065 ~ 968293 (-)
G78593 NA non-coding upstream 150010 1049917 ~ 1051630 (-)
G78296 NA other downstream 872654 26528 ~ 26897 (-)
G79690 NA other upstream 1913340 2813247 ~ 2815392 (-)
G80262 NA other upstream 2665264 3565171 ~ 3567537 (-)
G80271 NA other upstream 2819526 3719433 ~ 3723607 (-)
G80399 NA other upstream 3004160 3904067 ~ 3906240 (-)
G80443 NA other upstream 3165035 4064942 ~ 4066017 (-)

Expression



Co-expression Network