G308680


Basic Information

Item Value
gene id G308680
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172850.1
NCBI id APWO02000117.1
chromosome length 3115925
location 2556327 ~ 2556569 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU424927
cttcaacatctccctgtgcagcgccactttCCCAatgtgcctcaagtccaccaccatcgctcccgtgccgaagaagtccacagtgtcctgcctcaatgactaccgtcccgttgcacttacacccatcatcatgaagtgcttcgagaggctagtcatgaggaacatcaagacacgactgccctcttcactggaccccctgcagtttgcgtatcgtcccaatcgctccacggacgatgccatcac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU424927 True 243 TUCP 0.56 1 2556327 2556569

Neighbor

gene id symbol gene type direction distance location
eif3m eif3m,LOC107602127,LOC107671036 coding upstream 319444 2221969 ~ 2236883 (+)
cstf3 cstf3,LOC107671440 coding upstream 443343 2076601 ~ 2112984 (+)
LOC103031553 pcyt1a,LOC108440592,LOC108264716,LOC107091881 coding upstream 708743 1834677 ~ 1847584 (+)
LOC103029868 NA coding upstream 765451 1787316 ~ 1790876 (+)
omp omp,ompa,LOC107660685,LOC107735103 coding upstream 806084 1745320 ~ 1750243 (+)
pex16 pex16,LOC107753012,LOC107669959,LOC106593118 coding downstream 437499 2994068 ~ 3009972 (+)
LOC103038331 LOC108433450 coding downstream 462590 3019159 ~ 3035820 (+)
cep126 NA coding downstream 513667 3070236 ~ 3107407 (+)
G308679 NA non-coding upstream 8463 2547599 ~ 2547864 (+)
G308668 NA non-coding upstream 86331 2440889 ~ 2469996 (+)
G308662 NA non-coding upstream 127026 2417911 ~ 2429301 (+)
G308659 NA non-coding upstream 142494 2410677 ~ 2413833 (+)
G308658 NA non-coding upstream 145712 2407912 ~ 2410615 (+)
G308681 NA non-coding downstream 513 2557082 ~ 2557382 (+)
G308682 NA non-coding downstream 4337 2560906 ~ 2561170 (+)
G308683 NA non-coding downstream 15835 2572404 ~ 2572789 (+)
G308685 NA non-coding downstream 42754 2599323 ~ 2599554 (+)
G308712 NA non-coding downstream 56169 2612738 ~ 2612952 (+)
G308643 kifc3 other upstream 218161 2319891 ~ 2338166 (+)
G308535 depdc7,LOC107758055,LOC107576633 other upstream 412364 2131079 ~ 2143963 (+)
G308506 abcc5,LOC106580650,LOC107670605,LOC107671530,LOC107672635 other upstream 536196 2017464 ~ 2020131 (+)
serp1 NA other upstream 723653 1827904 ~ 1832674 (+)
G308090 NA other upstream 2370252 185337 ~ 186075 (+)

Expression


Co-expression Network