LOC103036707


Basic Information

Item Value
gene id LOC103036707
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172850.1
NCBI id APWO02000117.1
chromosome length 3115925
location 1340467 ~ 1352751 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022665982.1
ATTGAGTGTATGGTGTTTAGAATGATTATTAACAGCGCATGGCTTCAGCATAACAAAATGTGAATAAAGTGAAAACTGTCTGTAAACATTACAATTCATTATGTGTACAATTCAACAGGGATGTACAGCAGGTCAGTGGAACAACTCTAAAAAGACTTTACCACTCTATAATGTTCCCTATGTACTGTAGACTCTTGAATGAGAACTTCCTGGCTTCAGGAAAATGGTGGTTAAtggatgggtcttccagcacgacaatgacccaaaacatacagctaAGGCAACAAAAGAGTGGCTTTAAAATAAGTACTTTATGATTCTGGAGTGGCCTAACCAGTCTCCAGACCTTAATCCCATAGATAATCTGTGGAGGAAGCTCAGAACGCTTGTTTTTAGGTGGATCAAATTTCacacattattaattaaaagtgaTCTACCCTCTGCTCTGTCAGGCTGGGTGGGTGGTACTGTTCACATTCCATGTAATGTAGCAGAAGAATAGACCTCTGCAGGAAGTAAAATACAATCAACAGTGAATGAGGagtggcagtgtgtgttttcACCACAATAATAcccctccccacacacacaccctttacCCAGACTTCCTGTTCAACACACAGCACTCACCATCAGGACGTGAACCCTCAGCCTGCTGGACCTGCTGCCCTGAGCTCCTGATGTGGACTGCTGGACGTGATGGTGGGTGAAGTTAGGATGGCGGGTGTGAAAGTTTACCTGTGTTCTAATCCAGAAGACTCTGTGGTGGAGAGGAAGTATCTGAGAGAGAATATATTCCCTAAACTGAGGGATCACTGCAGGAGGACGTATGGAGTCGATTTCAGGGTTATTGACCCCTATGAAAGGGTGGACTCAGCCAACTGGCCTACACAGGAGGAGCGACGGCTGTTTATTGAAGAGTGCAGGGAGAATTCACTGGGGCCTTTCTTTGTGGCTCTGGTGGGTGAGCAGTATGGGACGGTGGGTTTACCTGAGCAGGTGGATCTCTGTGAGTTCATGCTGTTACTGCAGGTGTGCCAGAACCTGGGCTTCAGCTGTGTCACTCTGGAGAAATTATACCGCAGAGACGAGAACACCATACCTCCCAAATACTGTCTCATCAGACTGGAAGTGGAAGACAGTGGCAGGCATGCTGATTTAGAAAAGGCGAGGATGATGATGCAGTACGCTGTGACTGAgtgtgttcagcagggagatATTAAACCAGAAGAAGCTCAGAAATATTGCACATCGGATCTTGAGAAGGACCTCTGCTTTGCACTGAAAGGCCGCTCTAGGGCAGATATTAAAAGATGTCTTTGTTACGTCAACAAGCCCTTTAAAACACCTGACCGGAGGAAGACAGACGATAAACAACCCACAGATTACCAGACAACATCAGTCGCTCTAAAGGAGCTACGGGAAGACTTCCTGCCAAACCTGGTCCAATCACACAAGGCCCTGGTGTACACCACCATTTCAACCACCACCATGGAGCTCAGCGGAGAACAGAGCTACGCTGAGGAGTTAGGCCATCAGCTCTATTCAGATCTGAAGCAGCTTATCGACCAATCTGTTGAGAAGAATGAAGATCAAACCCAGGGATTCTTCTCTCAGCAGAGAGAACTGTGTGATATCTTTTCTCGGCTCTATAAAATCGAACGAGACGAGGTCACGCATGTCAGAGCTTATCTGGAGCAGGACACTAATCGGCCTTTAGTTCTGGTTGGTGGGCCGTGCACAGGCAAAAGTGTGTTTCTGGCCCACTGTGCAAATCAGatCAAAACATGGATGAAGGATCAGGACCCTGTGGTCATCGTGCAGTTTACAGATTCGAACACCTCTTTGAAACAAAGTCTTCTCAGCATGTGCCATCAAATCGCTTCAAGCTACAATCTTCAATACAACACCCATcccaaaaacattttcaaattaaaagaaaCTTTTAGCAAACTCCTGTCTATAATTGCTGAGTCCTCAAAGCCTCTGATCCTGATTATAGATGGATTTGACCAAATGCCAAATGGACCAGTAGACATGACCTGGCTTCCCAAGACTTTACCTTCTAACGTAAAGCTAATAATCTCGTCCACACCTATGAAGTCTGGGTTTCTCTCTGCAATCAAGAGTCATTACTCAGAATCAACCTTGTTCTTTGACCTAGAGCCGTTAGATAGTAAGAGTTGTAACCAGATGCTGACGACTCTGCTCTTGGCAGCCAATAGGAGGATAACATCAGGTCAGCAAATGTATGTAAATCAAGCCTTTAAGGAATGTTCTCTCCCCTTGTATGTGGAGCTCTTGTTCAGACAAGTGAGGTGCTGGGGCTCAGAGTTGGAGATTACCCCTGATACATTGGTCCCAGGGGTCCATGCCAACATTGAGCTGTTCTTAGATCACCTTGaggaaaaacatggaaaagtgTTGATCAGTAGAGCTCTGCAGTATCTCTCCTTGTCAAGGCATGGCTTGACCGAAGCTGAGCTGACTGATATACTCTCTTGTGATGATGAGGTTCTGTCTGATTTCCTCCCACTCGACAATGATGTTCCTTATAAATCAAGAGTTCCAGAAATTGCTGTGGAAGCAGTACTCCTAGACCTGAAGGGATTCATGATTCCTAGGAACACTTTAGGAACCTTGTTCTGGGCCAGCAGACACTTCAACTTGGTAATCAATAAAAGGTACTTGTCTTCAAATGAGCAACAGAGCATGTATTCATTGTTGGCAAACTACTTTAGTGGCCGATGGGCTGGCGGCACAGCTAAGCCATTAACCTTCACTGCAAGCCATGGCTCAAAAATGTCAGACTCCATCACTGTGCAAAAAGCCATGCCAAAGAAGATGTATAGCAATAGGCAAGTTCCTGGCCAACCCTGGATGTTTCAACCCTTGGCCGCCGCTCTGTGCAATTCAGGTTTGTCTAAAAGTGCTCATCCCAACTTAAGAAAATTGCAGGAGTTGCCTTTTCACCTGATGCAGAGTGGCAGTTTTGAGGAGCTTGGACGCATGATGCTCTCACAAGAGTTCCTTGATGCAATGTTCCAAGCAGGGTTGGAAGAGGAATTGGTGTTTTGGATTGAGGAGGCATCTCGGAACAGATTTCCTAGGGCACTTAGACTTCTTGCTACCTTCCTGAAAACCTCAGACTGTTGGATGAAAGACTGCACTGCAGACTTGGTATTGGTAATGCAGGCTCACCTATTCCCCTTTGTGAATGTGTTCCCTAAGCTAGGGCAGTTTGTCAACCAGACAATACATGATGGTAAAACGAGACGCTCTGGGGTGTCTACGATATTATCCCCATCACCCTCTGTTCCTGCCACTCATTGGGAACTACCATCAGCCAAGGTCTCTCCATTTGTGAAGGTAGATCTAGCTCAGTCTGAGTCTGCTGTAGTGATTCAAGACAATGGTTCAGCTTGGGTATGGAATGGAAGCGATTCTGAAGGCTTCAATCTCTCGCAGTCATCCAAATTAAAGTTTGCAGATGTTAGATGTGCTGCAAATGTTTTCATGCTCTTGACGCAAAGTGGCAAACTCCTTTTGTGGGATGTTAATGCTCCAAGCTCATACTTTCAAGAAGTTCAGACCCATCAGGAGGAACAAGGCCAAGAGAGCACTCTTCAGAGCATTGACGGCATCTTAGTGTCCAATCGCAGGATCTTTGCATTTTCTAGGGGAAGAAGTTTTGTCCAGGTTTTTGAAGAGAGAAGGGAAGTTGCTCCACTCCAGTGTTCTTCTTTTGTAACATGCATGTCCTGTTCTGTGGATGGATACATGATTTGCTGTGGTCAGAATGATGGTACTCTAAGTATATTTGACTCCCAGAGTGGACTTCCATTGACCTCTTTCATTTGCTCTAAAGGAATGCCTTTGTTTGACCTTATCCTCAACGAGAACGAAGAGGCAATATCAGGTGTTGACTGTACAGGAAGTGTGTTCGTGTGGGACATTAGGATTCCAACCATTCCAGAACTCATTAAAGAGAGTCTCAGCTCTAGCAAAGAAGACGTCTTAAATACAGATCACTCTGAGGAAGGTCTTCTTCTCATCTGTAAAAGACAACGGATCCAAATAGTTTACATACTTCTGTTGGACATTGAAGACCAATTCAATGCTCCAAGGGGCAAAACTTTCATTCAAGCCATTTTAGATCCAGAGGCACACTTCATCATAGCTTTGGTGAAGGACTGCTCATTTCTTTTGGTCTGGAACTTGTTTtcaggtcagtgtgtgttaaGCCTAGACTTTGGAAGCACTGAAGCTTTTAAACTGATGAAGCCCAAGGAATGTCCTAACCTTACGGTCGTCACAAGCACAGGCATTACTAATTGGGACATGGACCTAGTTTCAGTGGCAGCTTCCACACCAAAATCAGGCAGGGAAGTTTTAAAGGTCATTGTTGGACCAAAAGGAGGACTCTTCTATACATCAGATGGTTCTGAGCTGGTGTGGAGGTGGACAGTTTTTGATTGGGAAGTGAAGAGCCACTTGCTTCATCATGGTCCTGTTGAAGACATGGCTCTTTCAGTGGATGGAAATCTCCTTTTGACCATTGCCTCAGGTAACATCTACGTCTGGAACACCAGTACAAATGCAAACATTCACAGAATCCAAGATAGCCAAGCAGCTCGGCTCTTGTTACCCCCAAAAGGCAACTCTGCAGTGTCTCTTTCAGAAACTGGTCTATCAAGAGTGTGGAACTTGTGCACTGGATTAGTCGTCTGCAGCATCCATCATCATCTCAGAGATGCCGTCATCTCACCAGAGAGGACCTTTCTCATGGGCATCAACAAGGGGGATCTTCTTGCTGTCAGTCTTTGGTCTGGTTACATCAGCAAGCAATTCTCCAGTTCTGAATGGTCTGAAGTTGTCGCCTTCTTCCCACTGATAGACCATCCAGACTGTGTGATGGTAATTACGAGTTCAGGAGCTTTGTACTCTTGGAGACTAACGGAAGACACTGTTTGCCAACGATTCCAGTTCCCAGACTCTTTCCAGTATCCTCCACAGTTCTTTAATGTCTTGTCTGGTGAAAGTTATGGCATGATATCTGTAGATGATTCCAAAATAAGCATCTTAGATGTGAAGAACTGTAAACTATGCTCCTTGAAAGCTGAAGGACCGGTCTGCCAAAAGTTTGTAGGCATCAGTGGTAAATATGCAATCTATATCTGTAGCCCTTCCATGATGTGTCGTAGTTACACTTGTGACCTTCATGCCAGGCATATCTTGGTTGCCATACGTGTAACTGATGGTAAGAAAGTGGGCAAGGTCTACCTATCTAAAACCCCCTCTGCTCTAACTCTTTCTGAGGAGTGCGTGTATGTTGGGTTTGAGGATGGTTCTGTTGGGGTGTATGCCATCAATGACGGAGATGGGAATGCCGTTTCCATGCCTAAATGTGGGAGCACAGGACGGATGTGTCCATTTGATGAACCTGAGGTTTGGTCGCCTTTAGCAAGCCCTAACATTTCTTGGGAGGACTTCAAATAATAGTGAAAAGTGTAGATGTCTTTCAGTAACAttctttaaattatgtatttcaATTGCATGAACAttgcatatttttattaggGTTGTCCTAATCTGATctatcaattttttattttatttggatttttaatttttaatgtgcTCCATCTGCATTGAGTTTTTAGAAGATAAATAAAGAGTTGGGTTTAATTTTACAGTGGAGCATGAAAACATCCCAtaatatctaaaaatatataaaacctgaATATTATGTGTTAGCCTAAACATTTTCTTGCTTATGTTAATTTCATAACACTTTAAGTGGTGTATaggttttaatttattgtttattgtacaaATGACTGTGCTTTTTTGTGATATTAATTTTTActagtttatttgttttgatc

Function

GO: NA

KEGG:

id description
ko04060 Cytokine-cytokine receptor interaction

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022665982.1 True 5888 mRNA 0.44 8 1340467 1352751

Neighbor

gene id symbol gene type direction distance location
LOC103036410 fchsd2,LOC107705784,LOC107594367,LOC107600282 coding upstream 6625 1179557 ~ 1333842 (+)
relt relt coding upstream 185178 1084433 ~ 1155289 (+)
arhgef17 si:ch211-248g20.5,arhgef17,LOC107660677,LOC107658857 coding upstream 267944 894860 ~ 1072523 (+)
p2ry6 p2ry6,LOC107705774,LOC107601092,LOC107660676,LOC107735228 coding upstream 453176 859048 ~ 887291 (+)
fam168a fam168a,LOC107600264,LOC107594362,LOC108264593,LOC107705757 coding upstream 498780 783475 ~ 841687 (+)
rps3 rps3,LOC102795110 coding downstream 1011 1353762 ~ 1361925 (+)
kctd14 kctd14 coding downstream 10963 1363714 ~ 1366089 (+)
ints4 ints4 coding downstream 24855 1377606 ~ 1401271 (+)
rsf1 rsf1,LOC102310057 coding downstream 63591 1416342 ~ 1434932 (+)
clns1a clns1a coding downstream 88019 1440770 ~ 1448730 (+)
G308324 NA non-coding upstream 2126 1337388 ~ 1338341 (+)
G308322 NA non-coding upstream 56694 1282837 ~ 1283773 (+)
G308317 NA non-coding upstream 76447 1263139 ~ 1264020 (+)
G308312 NA non-coding upstream 113644 1226205 ~ 1226823 (+)
G308307 NA non-coding upstream 115002 1195576 ~ 1225465 (+)
G308388 NA non-coding downstream 86507 1439258 ~ 1439566 (+)
G308441 NA non-coding downstream 278408 1631159 ~ 1632002 (+)
G308444 NA non-coding downstream 291083 1643834 ~ 1645171 (+)
G308448 capn5,LOC108264643,LOC106535735,LOC107713096,LOC107665347 non-coding downstream 384689 1737440 ~ 1741024 (+)
G308453 NA non-coding downstream 419153 1771904 ~ 1784753 (+)
G308090 NA other upstream 1154392 185337 ~ 186075 (+)
serp1 NA other downstream 475153 1827904 ~ 1832674 (+)
G308506 abcc5,LOC106580650,LOC107670605,LOC107671530,LOC107672635 other downstream 664713 2017464 ~ 2020131 (+)
G308535 depdc7,LOC107758055,LOC107576633 other downstream 778328 2131079 ~ 2143963 (+)
G308643 kifc3 other downstream 967140 2319891 ~ 2338166 (+)
G308680 NA other downstream 1203576 2556327 ~ 2556569 (+)

Expression


Co-expression Network