G84790


Basic Information

Item Value
gene id G84790
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 12184942 ~ 12201975 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU96501
GGCAGATGTGGGTTTAAAGACACTGATGGTGTTTCCATAGCAACTGATACAGAGGAAACCAGTGTGTAGCAGATGAAGCATGTTTGAGGATGTGTTCTGTACCGTCTTGCACTCCTCTTGTTTAATTTTCAGTAGGTTGTTCTTCAGACACTCCTCCACTTGACCCGTCTGTTCCTGTGCGGCAGCTTCCTCTGCGCACAGCCGCGTGATCTCATTATTGCAGTGAGCCTGGAGCTGCGGATCGAGCCGGTAGTCGAGTGCTGACTCCTGAAGAATCACTCTGATCTGATCCTCACATTCTCCAGACAACCGCTGGTCTGCATACTTGAGTTTGAGGCAGGATATGACTTGACCCTCCAGTTCATTGGCATCACTGGCTTTGTTGAGAATGTTCTGACAGAACTTGGGAATGTCTGGCTTACAAGCCTTCCTCAACACTGGGTTCAATCTGTAGTCTGTATTCTGAGTGATTTGTCTCTTGGTGATCATCTGCTTACACTTTGGATCCATTAGCTCGCTGTTCTTGTTCAGTTTTAGACACTGCAGGACGTTCTTAGCATCTGACTCTGTGCAAAAACGCTTGATCATCTGCTTGCACACTCTCATGAGCTGATAGTCCAGCTCTGGATCCATCATCTCAGTTTCCTGAAGCTTAAAGACCTTCTGATGACACACCTGGGAAAGCTGCTTCTTGTTCTCTTTGAGACACTCAATGATCTGAGCATTTCCATAGGCAAAAGAGGAACAGAGCTTGTTGATATCCTTCTTACAAGCGTCATGTAGCTCAGGTTCTAGTCGAATGTCCTCTGACATCTCCAGCTCTTCCACCCTCAGCTGTTTCCGACATTTCAGAGAGACACGCTGATCTTTCACTTCCTGTAGTGTGTCGTTCCTCACTGTGGTGCTCAAACAGATGACAACATCTGCCTTCTTCTTAATGTTTGGACAGAGTTTGAGTACGTCCTCCTTGCAGGCCATTTTGAACTTGTAGGAGAAGCGGAAGTCCTTCATCTGAACCAGCTGGAAATGAGTGACGCCCACAGCACATTTATCATTCATTTCCCTCTGATGTTTGTTCTGCACCAGGCATTCTAGAAGATTCCCTGTGTCTATCTGATTATCAGCTATGTCATGGCAGTGGTTCTGGATGACCTGTTCACAGGCTCGGATCAGCAGGGCTTCAATCTGAATATCCTCAGATTCTAGTTCCGTCAGGTTTCCCACTACGTCTCTGCAGTTTGACACCAGGTCCTCTAGATGGTCCTGAAGACACTCCAGTTCCTGTCCAGTGTCTGTCTTCTCACTGCACCATTTTCCCAGGTCAGTCATGCAGCGTTTCTGGAGCTCAGGGTCCAACTTAACATCCAGAGCTCTCTGGTGAAGAATTCTCTGGACTTCCACCTTACAGTCCCTCGTGAGCCTTCTGCCCTGCTCTTCTGTCCGGTAAGCATGGCGGTGCAAGCAGGAAAACACAGCGCCAGGAGGCATGAGATCAGTGCTTTCATTCCAGCCTGGTGTGTAGCACAGTCTGGATGCATCGTTCTGACATTTACGGTATAAGACAGGATCAAGCTTCCAGTCTCTTGAAATGAAGTACTGCAGCTCCAGCAGGCGGTGTTCACAGTCCTGAACCATCTTCTCTGTGTAAAGGTGCTCCATTAAACAAGACAGAATCATAGGATCTCCGCTACGGATGTGTTTGCAGGCTGTCTGGATCACAGACTCACAGGCTTCGTTCAACGCGCGATCAATCCGGTAATCAGTGCCGGGGTCTGCTGACTGGATAAGAGTCTGAAGTGCTGTCTGACAGAGGTTGTCCACCATGCCCTTGTCCCCTCGGGCGACTCTCATGAGGCAGTGGAGGGTCCGGCCCTTGCGGTGCAGTCCTGAGCAGTGCGCCTCGATCTCTCCTCGACAATGCAACACGATCTCAGGGCTCAGGGAGAAATCCTCCATTAGCATGCGTCTGTAGTCCAGCATCTCACCCTGACAGTCTCCGGTCACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU96501 True 2005 TUCP 0.49 16 12184942 12201975

Neighbor

gene id symbol gene type direction distance location
CI01000013_12099659_12100829 GCSHA, GCSH coding upstream 83666 12097363 ~ 12101276 (+)
CI01000013_11937264_11960076 IQSEC3B coding upstream 224616 11936811 ~ 11960326 (+)
CI01000013_11904219_11919859 DDX11 coding upstream 265035 11903696 ~ 11919907 (+)
CI01000013_11847961_11850982 TNNI1C, TNNI1D, TNNI1 coding upstream 333854 11847961 ~ 11851088 (+)
CI01000013_11771727_11775044 MIOX coding upstream 409898 11771727 ~ 11775044 (+)
CI01000013_12260938_12264631 NA coding downstream 58963 12260938 ~ 12264631 (+)
CI01000013_12272623_12275499 NIP7, NIP7.L coding downstream 70648 12272623 ~ 12275721 (+)
CI01000013_12314589_12315317 RGS9BP coding downstream 111200 12313175 ~ 12315509 (+)
CI01000013_12379804_12398839 NA coding downstream 177546 12379521 ~ 12398839 (+)
CI01000013_12459982_12465113 PDCD10, PDC10, PDCD10B, PDCD10A, PDCD10.S coding downstream 258007 12459982 ~ 12465573 (+)
G84775 NA non-coding upstream 46832 12137191 ~ 12138110 (+)
G84769 NA non-coding upstream 53408 12127831 ~ 12131534 (+)
G84741 NA non-coding upstream 89483 12047870 ~ 12095459 (+)
G84736 NA non-coding upstream 144029 12039518 ~ 12040913 (+)
G84705 NA non-coding upstream 207903 11974147 ~ 11977039 (+)
G84820 NA non-coding downstream 31271 12233246 ~ 12233784 (+)
G84867 NA non-coding downstream 174914 12376889 ~ 12377247 (+)
G84879 NA non-coding downstream 217928 12419903 ~ 12420119 (+)
G84898 NA non-coding downstream 274676 12476651 ~ 12476877 (+)
G84899 NA non-coding downstream 276278 12478253 ~ 12478528 (+)
G84768 NA other upstream 14124 12169989 ~ 12170818 (+)
CI01000013_10756927_10790192 FRMD4A other upstream 1400185 10756927 ~ 10792761 (+)
G84250 NA other upstream 1968980 10215127 ~ 10215962 (+)
G84215 NA other upstream 2105606 10076454 ~ 10079336 (+)
G84194 NA other upstream 2148149 10030608 ~ 10036953 (+)
G84864 NA other downstream 163074 12365049 ~ 12375905 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location