CI01000015_03608694_03649223 (KLC4)


Basic Information

Item Value
gene id CI01000015_03608694_03649223
gene name KLC4
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000015
NCBI id null
chromosome length 8631711
location 3608376 ~ 3649223 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000015_03608694_03649223.mRNA
ACATAAAAAGCCTCAACGGGGGAATTTTTCTACTAACAGCTGTGGCTGGCCTTAGTTGTTCCTTTCTGGTTAATTATTAAAAGAGGACTATCAGAGCAAGGTTTAACTTCTAAGTAAATGATTTTCATTGTGGAAATTAAAAGGTATATATAGTAAGCAATTTCATTAAATTGTTTTGTGAAAGACTTTTGATGCATTATATATAACACATTTATTCATTATTATACTTTAATAAATAGTTATTCTAAGACAAAAAGGACTATTATCCCTCTTTTGATTAGTCAGTGTTGGATGCAAGGCACTATTGATTTAGATCACATGACCTACTGGAGGCTGAATGAGTGGGTATCACAGCATGAGACTGATGTTGTCAGAGATTCCGGGCCTCCTGACCTCTATCAGAGCATGTCCACCATGGTTTACCCCCATGAGGAGCGACTGGAGAAGCTGACGCAGGAGGAGATCATCTCCAGCACTAAACTGGTGATTCAGGGTCTGGAAGCTCTCAAGAGTGAGCACAACTCCATCCTGCAGAGTCTGCTGGAGACCATTCAATGCTTAAAGAAAGATGAGGAGGCCAGTTCGGTTCATGAAAAGTCCAACCTTCTGCGCAAGTCTGTGGAGATGATTGAGCTGGGCCTGGGCGAAGCACAGGTGATGATGGCCCTGTCCAGCCACCTAAATGCAGTGGAGTCAGAGAAACAGAAATTGCGTGCTCAGGTGCGAAGGCTCTGTCAGGAGAACCAGTGGCTGAGGGACGAGCTGGCAAACACTCAGCAGAAACTCCAGAAGAGTGAACAGAGTGTCGCACAGCTGGAGGAGGAGAAGAAACATCTGGAGTTCATGAACCAGCTCAAGAAATATGATGATGGCACCTCGCCAGTGGAAGAGAAAAACAGTGAGACTCCCAAAGATACCCTGGACGATTTGTTTCCCAATGATGAAGATGACCAGGTCTCACACCAGCACAACAGTGCCGCGGTTGCTGCCGCACAGCAGGGTGGGTATGAGATCCCAGCCCGCCTCAGGACCCTCCATAACCTGGTGATCCAGTACGCAGCTCAAGGCCGGTACGAGGTGGCCGTGCCTCTCTGCAAACAGGCTCTGGAGGACCTGGAAAAAACCTCTGGACACGACCATCCCGATGTAGCCACCATGCTCAACATCCTGGCTCTGGTCTACAGGGACCAGAATAAATACAAGGAAGCTGCCCATCTTCTTAATGATGCCCTGTCAATCAGAGAAAAGACCCTGGGCAATGACCACCCAGCTGTGGCGGCCACTCTCAACAACCTGGCGGTCCTGTATGGAAAGAGAGGAAAATACAAGGAAGCAGAACCGCTGTGCAAGAGAGCCTTGGAAATCAGAGAGAAGGTGTTGGGACGGGACCACCCAGATGTAGCCAAGCAGCTGAATAATTTGGCCCTGCTCTGTCAGAATCAGGGGAAGTATGAGGAGGTGGAGTATTATTACTGCAGGGCTCTAGATATCTACGAGAAAAGACTCGGACCTGATGACCCAAATGTCGCCAAGACCAAAAACAACCTGGCTTCATGCTATCTGAAACAGGGCAAGTACAAGGAAGCTGAGATTCTCTACAAAGAGATCCTGACGCGCGCCCATGAGAAAGAGTTCGGATCTGTAGATGCTGAAAATAAACCCATCTGGATGCACGCTGAGGAAAGAGAAGAGAGGAAAGGAAAGCTAACAGATGGGAATCATTATGGAGAATATGGGGGCTGGTACAAAGCCTGCAAGGTGAACAGCCCCACGGTAAACACCACGTTGAGGAACTTGGGCGCTCTGTACCGTAAACAGGGTAAACTAGAGGCGGCCGAGACCCTAGAGGAGTGTGCCATGAGGTCCCGCAGACAGGGAGCGGCAGTGGACCCTCAGAGAGATGGAGACAGGCGGAGGAGCACTGCGTCAATCTCCAGTGTGAAGTACGACTGCAGCAATGAAGGCGGAGAAGAGGGCAGTGTGGAGTGGAATGGGGCCGCCTCCACCCTGCATGCAATGGCCATCCTGCAAGTCTATCAGACCAAAGCATTGAAAGATCTGCACGAGGGTTATCCTGACCCAGAGGTAATGCAGGAACTGCGTTCGGCAACTGACTGTGCCCTTCAGGCAACAAACCCAGACATCGAGTGTTCGCACCAGAACATTGGTGGATGTGAATATTCCCCCCCTCCCTATGTTCTGTTGCAACAGTTCTGCACAGAGCAGGATGGATCTCTCAGGAGAAGCGGCTCTTTCGGTAAACTCAGGGAAGTCCTGCGCAGAAGCAGCGAGATGCTGGTGAAGAAAATCCAAGGAACTATGCCACCTGAACCTCGCAACACAAAAATGATTTATGAACAGCAACCATTTAATTTTGGGTGTGTCATTTATGCCCCACTTGCCAGACTGGGGGTTGCATGTATGAAGAGAGCTGCGTCCCTCGGTTACCTGAACAGTAATGGAGATGATGACGACTCTTTTCAG

Function

symbol description
klc4 Predicted to be located in cytoplasm and microtubule. Predicted to be part of kinesin complex. Orthologous to human KLC4 (kinesin light chain 4).

GO: NA

KEGG:

id description
K10407 KLC; kinesin light chain

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000015_03608694_03649223.mRNA False 2484 mRNA 0.49 18 3608376 3649223

Neighbor

gene id symbol gene type direction distance location
CI01000015_03592958_03598421 NA coding upstream 7862 3586556 ~ 3600514 (+)
CI01000015_03558039_03580054 NA coding upstream 28252 3558039 ~ 3580124 (+)
CI01000015_03498502_03512450 ACY1 coding upstream 95494 3498502 ~ 3512882 (+)
CI01000015_03482829_03494230 NA coding upstream 114146 3482829 ~ 3494230 (+)
CI01000015_03464878_03470145 NA coding upstream 137701 3463137 ~ 3470675 (+)
CI01000015_03660564_03665735 NA coding downstream 11341 3660564 ~ 3666760 (+)
CI01000015_03689293_03707456 PTK7A coding downstream 40070 3689293 ~ 3707616 (+)
CI01000015_03733443_03765495 MARK1 coding downstream 84220 3733443 ~ 3765508 (+)
CI01000015_03826245_03844971 ELAVL2 coding downstream 177022 3826245 ~ 3845390 (+)
CI01000015_03852286_03855347 NA coding downstream 203015 3852238 ~ 3855541 (+)
G88826 NA non-coding upstream 140968 3466907 ~ 3467408 (+)
G88866 NA non-coding upstream 158436 3449624 ~ 3449940 (+)
G88820 NA non-coding upstream 241917 3295239 ~ 3366459 (+)
G88804 NA non-coding downstream 1778 3651001 ~ 3652716 (+)
G88823 NA non-coding downstream 130779 3780002 ~ 3781041 (+)
G88910 NA non-coding downstream 161688 3810911 ~ 3811145 (+)
G88939 NA non-coding downstream 197792 3847015 ~ 3847224 (+)
G88926 NA non-coding downstream 304985 3954208 ~ 3959652 (+)
CI01000015_03011472_03026518 NA other upstream 578086 3011472 ~ 3026636 (+)
CI01000015_02512276_02523824 NA other upstream 1091947 2511546 ~ 2524572 (+)
G88172 NA other upstream 1107782 2384016 ~ 2526510 (+)
G87972 NA other upstream 1731782 1876004 ~ 1876594 (+)
G87432 NA other upstream 1996989 1611083 ~ 1611387 (+)
G89822 NA other downstream 642623 4291846 ~ 4314351 (+)
G90622 NA other downstream 1565073 5203697 ~ 5400121 (+)
CI01000015_05409997_05413784 NA other downstream 1759143 5409997 ~ 5413845 (+)
G90777 NA other downstream 2254871 5744146 ~ 5907461 (+)
CI01000015_06054566_06083712 NA other downstream 2414559 6054452 ~ 6083969 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location