G60229


Basic Information

Item Value
gene id G60229
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 49476685 ~ 49476907 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU81164
gatacatcacaaagacttgctgtcttggtcacagatgcaccagcaagacgtgcaccaacaatttgtcctcttttgaactctggtatgtcacccataatgttgtgtgcattgcaatattttgagcaaaactgtgctcttaccctgctaattaaaccttcacactctgctcttactggtgcaataatgtgcaattaatgaagattggccaccaggctgctccaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU81164 True 223 lncRNA 0.43 1 49476685 49476907

Neighbor

gene id symbol gene type direction distance location
acbd6 acbd6,LOC107665066,LOC107603185,LOC107758008 coding downstream 56278 49355537 ~ 49420407 (-)
LOC103035796 bsn,LOC108265177,LOC107698426 coding downstream 505547 48939737 ~ 48971138 (-)
apeh apeh,LOC107730641,LOC105013991 coding downstream 539360 48917782 ~ 48937325 (-)
tlr9 NA coding downstream 559554 48911988 ~ 48917131 (-)
erc2 NA coding downstream 573844 48522249 ~ 48902841 (-)
LOC103029024 LOC108411638,LOC107603148 coding upstream 138414 49615321 ~ 49623205 (-)
LOC103027347 doc2d,LOC108413517,LOC108265638,LOC107665068,LOC107598995,LOC107755308,LOC107603001,LOC107699113 coding upstream 338317 49815224 ~ 49868068 (-)
lonrf1 lonrf1 coding upstream 439744 49916651 ~ 49928619 (-)
LOC103027049 jak3 coding upstream 536196 50013103 ~ 50052446 (-)
slc5a5 slc5a5 coding upstream 578360 50055267 ~ 50069778 (-)
G60227 NA non-coding downstream 39303 49423473 ~ 49437382 (-)
G59940 NA non-coding downstream 205443 49269074 ~ 49271242 (-)
G59923 NA non-coding downstream 277965 49198425 ~ 49198720 (-)
G59920 NA non-coding downstream 334698 49140593 ~ 49141987 (-)
G59872 NA non-coding downstream 417357 49058951 ~ 49059328 (-)
G60235 NA non-coding upstream 50031 49526938 ~ 49568740 (-)
G60238 sin3b non-coding upstream 76228 49553135 ~ 49555126 (-)
LOC111192698 LOC103028085,LOC108411637 non-coding upstream 181535 49658442 ~ 49666402 (-)
G60275 dedd,LOC108411641,LOC107599036,LOC107665071,LOC107755304 non-coding upstream 196731 49673638 ~ 49701737 (-)
LOC111192699 NA non-coding upstream 270102 49747009 ~ 49749508 (-)
G59951 NA other downstream 171433 49304608 ~ 49305252 (-)
LOC103030200 cacna1e,LOC108265205,LOC108265123,LOC108265206 other downstream 284660 49062519 ~ 49192025 (-)
selenok selenok,selk,LOC107750820,LOC107693600,LOC107594974 other downstream 1557271 47816355 ~ 47919414 (-)
LOC111192697 NA other downstream 2025293 47448958 ~ 47451392 (-)
LOC103040795 LOC108412055,LOC108265574,LOC105899021,LOC108412246 other downstream 2062251 47196651 ~ 47414434 (-)
LOC103046211 ski,skia,LOC108410624,LOC107599811,LOC107657901,LOC107699765,LOC107548407 other upstream 1088382 50565289 ~ 50630164 (-)
G60441 NA other upstream 1350788 50827695 ~ 50832200 (-)
LOC103032656 LOC108413501 other upstream 1939313 51416220 ~ 51508580 (-)
LOC103045940 slc6a6a,LOC108441104,LOC108264963,LOC107714566,LOC107696920,LOC107552205 other upstream 2062591 51539498 ~ 51580634 (-)
G60627 NA other upstream 2229431 51706338 ~ 51708112 (-)

Expression


Co-expression Network