CI01000016_06162256_06162804


Basic Information

Item Value
gene id CI01000016_06162256_06162804
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 6162154 ~ 6163022 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_06162256_06162804.mRNA
TGTGTCTGGTGTGGCTGCACACGTCTCACAATATGGTAATGTACTTTTCCTAATTCTCCATACAAGTTAAATGTTAAATGAAGTTAGTTTGAATTATTTGGATTATTTAGAGTGTCCATCTGTCATATCTTCAGTACATAACAATATTTCCTTCTCTAGTATCTATATTCTGAAATAATGACAGTTTTGCACTTACACAACTTCCTCAGATCCTAAAAATGCTGTCATTTATGGTCATCTTCAATCTCATACTCCACACCTGTCTGAGTGATCTGGACATGCTGCATCCGTCTCAGCCCTGCACTGAAGCGGAGAACAACAATGGTTACAACACATTTCTTAGCCGACACCTGCGTAAGGGCATCCCAACTGATCTGGACAAAAAGAAATGGCAGAAGTTCATTACAAAACTCGACAGCTGGAAGAGGAAGAAACAGTCTTTTTTCCGCTTTACTGAATCAAAGCGTGTCGTAGCTGTTTGTTCATCAGGAGGAAAGATGTATAAGGGCAACCTCTGCATCAGCAAGAAATCTTTTTCTTTTTTCACTGTTGAGATCAACAGTATAAAGAAAATAGTCAAAAGAGTGCAATTTCAGAAACAACATGTAATTCTTGCCTGTGATAAAATTGACAACACATGTTTACCTGTTCATTTTGATGAAAATACAGAAAATATTAAACCAGATATCAACAGACGAGACTGCAGTAAATCAAAGCTTAAGGAAAATACAACATCTGTTTATGATGAAGTGTTTCCCTGGCTCTAATGTAACTGCAGAAAACTGACCTGTAGAAGATTTTTTTCAGCATCCCTTTTTTCATTTTCTGTAGAACTATTGATGCAATTGTTGATGAAAAATATAAATAAA

Function

NR:

description
Carbonic anhydrase 14

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_06162256_06162804.mRNA True 869 mRNA 0.36 1 6162154 6163022

Neighbor

gene id symbol gene type direction distance location
CI01000016_06147867_06148327 NA coding downstream 13806 6147708 ~ 6148348 (-)
CI01000016_06146332_06147633 NA coding downstream 14487 6146223 ~ 6147667 (-)
CI01000016_06138000_06138287 NA coding downstream 23729 6137607 ~ 6138425 (-)
CI01000016_06131958_06135495 NA coding downstream 26659 6130778 ~ 6135495 (-)
CI01000016_06069691_06109173 ITGA10 coding downstream 52981 6069290 ~ 6109173 (-)
CI01000016_06168667_06173080 DSCC1 coding upstream 5645 6168667 ~ 6173080 (-)
CI01000016_06253158_06263923 NA coding upstream 89809 6252831 ~ 6264056 (-)
CI01000016_06387119_06398090 MRPL13 coding upstream 223560 6386582 ~ 6398090 (-)
CI01000016_06424554_06462224 SNTB1 coding upstream 261093 6424115 ~ 6462618 (-)
CI01000016_06508677_06514489 HAS2 coding upstream 345115 6508137 ~ 6514489 (-)
G97335 NA non-coding downstream 10474 6151441 ~ 6151680 (-)
G97333 NA non-coding downstream 19101 6142747 ~ 6143053 (-)
G97310 NA non-coding downstream 66919 6094880 ~ 6095235 (-)
G97303 NA non-coding downstream 81658 6080274 ~ 6080496 (-)
G97201 NA non-coding downstream 177330 5984069 ~ 5984824 (-)
G97224 NA non-coding upstream 49530 6212552 ~ 6212818 (-)
G97187 NA non-coding upstream 49973 6212995 ~ 6213650 (-)
G97237 NA non-coding upstream 50890 6213912 ~ 6214493 (-)
G97357 NA non-coding upstream 55004 6218026 ~ 6218316 (-)
G97358 NA non-coding upstream 56205 6219227 ~ 6220930 (-)
G97341 NA other downstream 2433 6158986 ~ 6159721 (-)
CI01000016_05412782_05415867 NA other downstream 743937 5412248 ~ 5415906 (-)
CI01000016_05325805_05330265 COX6B2 other downstream 831308 5325519 ~ 5332874 (-)
CI01000016_04921091_04922518 NA other downstream 1238750 4918975 ~ 4922518 (-)
CI01000016_03921124_03930996 NA other downstream 2231103 3920055 ~ 3931162 (-)
CI01000016_08893013_08893496 NPPCL, ANFC1 other upstream 2725811 8888833 ~ 8894737 (-)
CI01000016_08926089_08945071 NA other upstream 2773767 8925960 ~ 8945229 (-)
G98679 NA other upstream 3071974 9234996 ~ 9239929 (-)
G98691 NA other upstream 3093080 9256102 ~ 9257611 (-)
CI01000016_09510177_09512196 ID4 other upstream 3346600 9509622 ~ 9512428 (-)

Expression


Co-expression Network