CI01000016_07871029_07871481


Basic Information

Item Value
gene id CI01000016_07871029_07871481
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 7870901 ~ 7873013 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_07871029_07871481.mRNA
ATATCTTCAATAATTAAAGGGTTAGTTCACCCAAAAATGAAAATTCTGTCATTTATTACTCACCCTCATGTCGTTCCACACCCGTAAGACTTTCGTTCATCTTCGAAACACAAATTAATTTATTTTTGATAAAATCTGTTGGCTCAGTGACAGCAAGATAATTAACACTTTCAGATGCCCAGAAAGCTACTAAAGACATATTTAAAACAGTTCATGTGACTACAGTGGTTCAACCTTAATGTTATGAAATGGCGAGAATACTTTTTGTGTGCGCCAAAAAAACAAAATAACAACTTTATTCAACAGTAACCAGTGATAGCCGATTTCAAAACACTGCTTCATGAAGCTTTGAAGCTTTGCGAATCTTTGTTTTGAATAAGTGGTTCGGAGCATTGCATTAAACTGCCAAAGTCACGTGATTTCAGTAAACGAGGCTTCGTTATGTCATAAGTGTTTTGAAATTTCAATGGTTCACCACTGGGGGACGTGACTTTATATGTTTGATACGTGCTCCGAACCACTGATTCGAAACAAAAGATTCTTAAAACTTCAAAGCTTAATGAAGCAGAGTTTTGAAATCGCCCATCACTAGATATTGTTGAATAAAGTCGTTATTTTGTTTTTTTGGCGCACAAAAAGTATTCTCGTCGCTTTATAACATTAAAGTTGAACCACTGTAGTCCCATGAACTGTTTTAAATATGTCTGTAGTAGCTATATGGGGATCTGAATGTGTTAATTATCTTGCTGGTAATGCAGGCCCCACTGAGCCATCGGATTTTATCAAAAATAAATTAATTTGTGTTCTGAAGATGAACGAAGGTCTTACGGGTGTGGAACGACATGAGGGTGAGTAATTAATGGCAGAATTTTCACCTTTAGGTGAACTAACCCTTTAAGTTTGCATGATTACTGTAGGTAAAAAGGTGTTTTTCTAAAATGATGTGGCAGTAACCGGCCATTCTCTTCCATCTAAATTTGGTTCAACTGAGTCATGGCTTCCACATATAATTTCCTTTAAAATGGAAAATTCTGTCAAACATGTTGTTCCAAACCTGTATTACATTTTTTTCTTAAAAATCGAGGATGTTTTGAGTATTCTGTGTCCATATATGAAAGTCAGTGGAGGTCTATAGTTGTTTTGGACCCCATTGACTTTCATTGTATATGGAAAACATCATTTAAAATATCTTGAAACAAACTTCAAAATATCTTATTTTGTGTTCTGCCGAAGAAAGAAAGTCATAGATGTTTGGAACAACATGATGACAGATTTTTTATTTTTATTTAAATTAGTACATGCGGGTCCCTTGACAATGGCCTATGTGTGTCAGTTTCTTTCTTGCCTTATTATTAGACACTTCCACTGAAATTTATGAAGTAAACAGAAGAAGCACTTTCTCTGCATTATCTGATCCGAGCCGCAAAGTGCTCTCACTCTTAACCTAAATGTCCTGCAGGAAATACCGGCGGAGGCTAGACTGAGTAACCTAATAAAGCCACAGCGCCTAAATCTTTAGACGGAGCGGAAACATGCCCCTAGAATACAGCCAGATGGAGATGCTAATTGGGTTTGGACCTCCAGTCAACAGCCCTGATGCCTTTGGGTTTCTATGTGCTCGACCAAGTGGCTGTATCAGGATGGAGGTGGACTTAGGTGACAAATTCACATGGAGAGAGATTGAGCAGGTCTTAGTGAAGGATGAAATTGCGATGAGCGGGACCCAGGGGAGAACAGAGATTTCTCGTTTGTTTCCAGGTACACCTACAGCACCGGGCTCCCCTGTCAGCGGCAACCTGAAACGAGTACATCCTGCTTATAATGCCACAAACAATTATGATGAAACTCTGAGGGGAGCAAATACGTAGCCATGCATAAATAGCACATATAAGTAAACAAACAATTTTGCACATGGAATATTTCACCCTGTTCTTTTGTAGTAGCCTAACTCACAATCTTTTTTTTCTTTAGGCTATTACCATAAACTAAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_07871029_07871481.mRNA True 1996 mRNA 0.38 2 7870901 7873013

Neighbor

gene id symbol gene type direction distance location
CI01000016_07845474_07849395 HDAC9B coding downstream 21475 7845474 ~ 7849426 (-)
CI01000016_07718096_07737432 ABCB5 coding downstream 133469 7718052 ~ 7737432 (-)
CI01000016_07556411_07633132 DNAH11 coding downstream 237769 7556324 ~ 7633132 (-)
CI01000016_07474484_07477222 NA coding downstream 393679 7473258 ~ 7477222 (-)
CI01000016_07421716_07426983 FHOD3B coding downstream 428645 7421590 ~ 7442256 (-)
CI01000016_07907730_07927048 NA coding upstream 33979 7906992 ~ 7927048 (-)
CI01000016_08022369_08033689 PLEKHA8 coding upstream 147917 8020930 ~ 8033689 (-)
CI01000016_08039526_08039834 NA coding upstream 166471 8039484 ~ 8039834 (-)
CI01000016_08042288_08066945 CHN2 coding upstream 169261 8040556 ~ 8067205 (-)
CI01000016_08111153_08185623 CREB5 coding upstream 238140 8111153 ~ 8185623 (-)
G97994 NA non-coding downstream 83141 7787528 ~ 7787760 (-)
G97982 NA non-coding downstream 107749 7762115 ~ 7763152 (-)
G97947 NA non-coding downstream 153851 7709979 ~ 7717050 (-)
G97970 NA non-coding downstream 167058 7703618 ~ 7703843 (-)
G97656 NA non-coding downstream 318648 7550952 ~ 7552253 (-)
G98022 NA non-coding upstream 32449 7905462 ~ 7905650 (-)
G98037 NA non-coding upstream 57514 7930527 ~ 7943707 (-)
G98063 NA non-coding upstream 95471 7968484 ~ 7968882 (-)
G98064 NA non-coding upstream 109532 7982545 ~ 7983426 (-)
G97341 NA other downstream 1711180 6158986 ~ 6159721 (-)
CI01000016_05412782_05415867 NA other downstream 2452684 5412248 ~ 5415906 (-)
CI01000016_05325805_05330265 COX6B2 other downstream 2540055 5325519 ~ 5332874 (-)
CI01000016_04921091_04922518 NA other downstream 2947497 4918975 ~ 4922518 (-)
CI01000016_03921124_03930996 NA other downstream 3939850 3920055 ~ 3931162 (-)
CI01000016_08893013_08893496 NPPCL, ANFC1 other upstream 1015820 8888833 ~ 8894737 (-)
CI01000016_08926089_08945071 NA other upstream 1063776 8925960 ~ 8945229 (-)
G98679 NA other upstream 1361983 9234996 ~ 9239929 (-)
G98691 NA other upstream 1383089 9256102 ~ 9257611 (-)
CI01000016_09510177_09512196 ID4 other upstream 1636609 9509622 ~ 9512428 (-)

Expression


Co-expression Network