CI01000016_08450823_08453343


Basic Information

Item Value
gene id CI01000016_08450823_08453343
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 8450628 ~ 8453377 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_08450823_08453343.mRNA
ATTTATAAGTGAGTTTAAGGGCTTAGCAGCAGGATTAAGTGCGATCTGTCAGCGAGGCAGGTCTAATGAGCATCTCGCATCACCAAATCCCTTAAACACAACAAAGGCCGCAGCTGAGCTTCCATAGTGATGTTGTTTGGACTTGGATAAAGTGTCACTCCGTGGTTTCATGTGGCTGTTTGTAGATTCAATACTATGAACAATGTGGGAATCCAAGCCTATGGGAGCAGATGCGATTTTCACAGCGGCGGTGACCTGCCCAACATTCGCTGTACTTTGATCCACCAGAATCAGGCTGAACACCTGCCCACCTTTCAACCTGTGTGCCAGAGCATTGGTCAGGGAAGCATGAAAGAGGAAACCTGCTCTTCTCCACTCAGACTTCCACCCATCTTGAGGAAACCGTTAAGCATCACTGGACTCTATATTCCAAGGGACAACAGGGTGTACCCAAAAAGGCATCATAAAGAGCAAAGCAAACAGGCTTATAGAAAGATGACTTTCAGTTATCAGAATGAACATATCCCTGCAGTCATTAGGGGACATCAACACTTCGGCTTCGGAGGATCTGTGTTGCCTGAGTCTGTTATCATTGAGCAATATTATGACCTCACCCTAACCAAGAAGAGTAATGTCCGACTGAATGACCAGCTTAAGAAGATGATTAAAGTTGATATTCCGAGGGAACATCCTTACAGCTCCCACATCCCCCGGTATCCTGCTATATTTCCATCATACCGATCCCCACCAGTCCAGCCCTCCAGTGCTTCTGCTCCTGTAGTTGTGTGGCGGCATCATCAAAGGAGCAAATAAACATAAAAGCTGTATAACAAAAAAATGTTATGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_08450823_08453343.mRNA True 847 mRNA 0.45 4 8450628 8453377

Neighbor

gene id symbol gene type direction distance location
CI01000016_08390421_08396972 NA coding upstream 52873 8390289 ~ 8397755 (+)
CI01000016_08323079_08336573 SKAP2 coding upstream 113941 8323079 ~ 8336687 (+)
CI01000016_08315282_08316952 HOXA2B, HOXA2 coding upstream 133450 8314973 ~ 8317178 (+)
CI01000016_08304658_08306198 HOXA9B coding upstream 143836 8302914 ~ 8306792 (+)
CI01000016_08299340_08301616 HOXA10B coding upstream 149012 8299340 ~ 8301616 (+)
CI01000016_08513514_08545976 OSBPL3B, OSBPL3 coding downstream 60137 8513514 ~ 8546137 (+)
CI01000016_08553934_08565167 DFNA5 coding downstream 99466 8552843 ~ 8565246 (+)
CI01000016_08628196_08630801 NA coding downstream 174819 8628196 ~ 8631378 (+)
CI01000016_08675783_08684401 KCNJ14 coding downstream 220034 8673411 ~ 8684506 (+)
CI01000016_08696516_08734418 MYH14 coding downstream 243139 8696516 ~ 8734660 (+)
G98177 NA non-coding upstream 44332 8406065 ~ 8406296 (+)
G98169 NA non-coding upstream 73815 8376521 ~ 8376813 (+)
G98103 NA non-coding upstream 76046 8358645 ~ 8374582 (+)
G98155 NA non-coding upstream 92349 8358023 ~ 8358279 (+)
G98193 NA non-coding downstream 4572 8457949 ~ 8458166 (+)
G98195 NA non-coding downstream 5451 8458828 ~ 8459071 (+)
G98098 NA non-coding downstream 113452 8566829 ~ 8569687 (+)
G98220 NA non-coding downstream 151221 8604598 ~ 8604812 (+)
G98221 NA non-coding downstream 151846 8605223 ~ 8605440 (+)
G97824 NA other upstream 434853 8014363 ~ 8015775 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other upstream 664905 7783987 ~ 7784996 (+)
G96389 NA other upstream 1289338 7160641 ~ 7161290 (+)
CI01000016_05405791_05407797 AICDA other upstream 3042765 5405791 ~ 5407963 (+)
G95792 NA other upstream 3224687 5219880 ~ 5225941 (+)
G98288 NA other downstream 542721 8996098 ~ 9002717 (+)
CI01000016_09796196_09842235 NA other downstream 1342254 9795950 ~ 9842576 (+)
G99041 NA other downstream 1471041 9924418 ~ 9925654 (+)
G99410 NA other downstream 1781023 10234400 ~ 10236851 (+)
G99456 NA other downstream 1841014 10294391 ~ 10298904 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location