CI01000016_10740961_10745890 (ABHD5A, ABHD5)


Basic Information

Item Value
gene id CI01000016_10740961_10745890
gene name ABHD5A, ABHD5
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 10739946 ~ 10745890 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_10740961_10745890.mRNA
ACATCACAAGCAAGTTCTACAGGCAGTTTGTCCACATATCTGACAAGAATACACTGTCGACGTTGGTATTTAAGGGACCAGTGGAAAATAAAACCCCTCTGGTGCTGCTGCATGGATTTGGGAGTGGTGTTGGACTCTGGGCCTTGAACGTGGACTCTCTCTCTCAGCAGAGGCCCATTTACGCCTTTGACCTGCTGGGTTTTGGCCAGAGCAGCAGACCTCACTTCAGCACTGATGCCCAGGAGGCTGAGCTCCAGTTTGTGGAGTCCATCGAACAGTGGAGGGAGAAACTGGGCCTGGAAAGTATGATTATGTTGGGCCATAACCTTGGAGGATATCTGGCTGCCTCCTATGCTATTACATACCCAACCAGAGTAAAGCACCTGATTCTGGTGGAACCGTGGGGTTTTCCAGAGCGCCCTAACACAGGAGACCAAGATAGGCCTATTCCTGTGTGGATCAAAGCTATAGGGGCAATGCTGAGCCCATTCAACCCCCTCGCTGGTCTCAGGTTGGCTGGACCTTTAGGTCCCACTCTTGTGCAGACTCTGAGACCAGACTTCAAAAAGAAATTTGCAGCTATGTTTAATGACAATAGAGTCACAGAATATATCTACCATCTTAATGTCCAGAGTCCAAGCGGTGAAACAGCCTTTAAAAACATGACCATTCCATATGGCTGGGCAAAGAGGCCCATGCTGCAGAGAATTGGCCTAATTCACAACGACATCCCCATTACGGTGATCTATGGCTCACGCTCCAGCATAGATGGCCACTCCGGCAATTCAATCAAAGAAATGAGGCCAAACTCCCATGTAGAGATCATTGTGAGTTCTCCATTTACTGCTCAGCACACTCTGCCACTCATAGAGACTTTTCATGATCTTTTGAGATAACAGCTTGATGTATTATGAAACATACTGCAACACAGATGAATGCATTTGAACACATGGTTGCCCACATTTACACGTCAGCAATGCCTATTGTGCGTTCAGAAACGTTAGTCACAGTGAGGTAATGAGAAAGACAGACTGTGCTGTTCCTGTCTGTGTGTAGCACCTACAACTCTGCATATCCTTCTGAAGGATCCCAGTGTTCCAAATGAGTGACTGAAGTTAAGGTTGTTGTTTTTTTTTAAGATCCCTTATTGCAATGTGATCTTAAAGAGGACCTATTATGCCCTTTTACAAAGTCTTGATTTTGTTTTTGACTTCTACTAGAATAGATTTTCATGCTTGAATGTTCAAAAACCTTATTTTTCACATATTTTACATGGTTGCAGCACCTTTTTTCTCAGTCTGCCAGTAACGCTTTGTTTAGTTCTTGTCTCTATAAAAGTCTCTCCTTCCGAAAAAAAAAGTGCAGTGTGTTCTGATTGGTCGGCTGGATCAGTGTGTTGAGATTATTCAACTGCTTCAAGTGTGCTTCAGATATGTCATAACCGTGTTAGATCCGGGGTGGGAAAAAACAGCGTCTCTTAGACATGCCGACAACACAACTCAACAAGACCTCTTTTTTTTTTTTTTTTTTTTGCATATGCCTTGGAAGGAATTATTTAACTGAGGAATATTGTGATGTTTACGTTCCGGTTTACATTCTAGAAGAAAACTCTAGAAGACTACAATCGAGGCATTACAGGGGGTTCAGAAACAGCGCTTTTCATGCTCAAAAAGCAACATTAGACAAAACATAATAGGTCCTCTTTAACAGTTTGTGTAGCATATTGCTTTGTGATTCTTTAATAATGCATGTAGAATTTTCAAAGAGGCTATTATGGAAGGATGGGGCAGTTAAATACTATTTTTGACACTTTTGAAACAATGGTGTATGAACACCACAGCACATCTCAGTCGGCATGCAAAGGGGATGATTCTTAAAGGCATTTTGACTGACTATTTTTAGCACAAAAAA

Function

symbol description
abhd5 Enables 1-acylglycerol-3-phosphate O-acyltransferase activity. Involved in negative regulation of sequestering of triglyceride; phosphatidic acid biosynthetic process; and positive regulation of triglyceride catabolic process. Located in cytosol; lipid droplet; and nucleoplasm. Implicated in autosomal recessive congenital ichthyosis 1 and neutral lipid storage disease.

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K13699 ABHD5, CGI-58; abhydrolase domain-containing protein 5

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_10740961_10745890.mRNA True 1911 mRNA 0.43 4 10739946 10745890

Neighbor

gene id symbol gene type direction distance location
CI01000016_10637748_10650217 TCAIM coding downstream 89729 10637639 ~ 10650217 (-)
CI01000016_10600154_10633808 TRIM71 coding downstream 106138 10599202 ~ 10633808 (-)
CI01000016_10571262_10572444 NA coding downstream 166078 10570705 ~ 10573868 (-)
CI01000016_10443526_10488009 NA coding downstream 251760 10442845 ~ 10488186 (-)
CI01000016_10386099_10386648 NA coding downstream 352464 10385825 ~ 10387482 (-)
CI01000016_10799559_10842613 SNRK, SNRKA coding upstream 53295 10799185 ~ 10843409 (-)
CI01000016_10897488_10911334 NA coding upstream 150296 10896186 ~ 10911334 (-)
CI01000016_10931329_10940939 ENTPD3 coding upstream 184922 10930812 ~ 10941053 (-)
CI01000016_10970952_10971167 NA coding upstream 224617 10970507 ~ 10971167 (-)
CI01000016_10989691_11026452 NA coding upstream 242487 10988377 ~ 11026452 (-)
G100346 NA non-coding downstream 2574 10736953 ~ 10737372 (-)
G100350 NA non-coding downstream 3067 10736548 ~ 10736879 (-)
G100413 NA non-coding downstream 24268 10652743 ~ 10715678 (-)
G100352 NA non-coding downstream 58240 10665429 ~ 10681706 (-)
G100351 NA non-coding downstream 188522 10529416 ~ 10551424 (-)
G100358 NA non-coding upstream 959 10746849 ~ 10749597 (-)
G100347 NA non-coding upstream 7724 10753614 ~ 10763884 (-)
G100469 NA non-coding upstream 146987 10892877 ~ 10893117 (-)
G100470 NA non-coding upstream 147681 10893571 ~ 10893899 (-)
G100508 NA non-coding upstream 207053 10952943 ~ 10953475 (-)
G100190 NA other downstream 687557 10051168 ~ 10052389 (-)
G99178 NA other downstream 924991 9814361 ~ 9814955 (-)
CI01000016_09510177_09512196 ID4 other downstream 1227518 9509622 ~ 9512428 (-)
G98691 NA other downstream 1482335 9256102 ~ 9257611 (-)
G98679 NA other downstream 1500017 9234996 ~ 9239929 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_010442 CU856516.1 non-coding NC_007127.7 CM002900.2 7968020 ~ 7984901 (-)