CI01000016_10989691_11026452


Basic Information

Item Value
gene id CI01000016_10989691_11026452
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 10988377 ~ 11026452 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_10989691_11026452.mRNA
ATGAGTGTAACACTTGTTGAGCGTTTAGAACACAGTCCAGCCAAAACGATGGACGCTGCAGAGTTCCGGAGACGCGGGAAGGAGATGGTGGACTATGTGGCGGATTATTTAGAGAACATTGAGAAGAGGCAGGTTTACCCTGATGTGGAGCCTGGATATCTGAGGTCGTTGATTCCCGAGGAGGCCCCGGAGGAGGCAGAGAACTATGAGGATGTGGTCAAAGACATAGAGAGGGTGATCATGCCAGGGGTGACTCACTGGCACAGCCCGTACTTCTATGCATACTTCCCTACTGCCCACTCTTTTCCTGCAATGCTGGCAGACATGCTGTGTGGAGCCATTGGCTGCATTGGATTCTCTTGGGCAGCGAGTCCTGCCTGTACGGAGCTGGAGACAGTGATGCTGGATTGGCTGGGAAAGATGCTGAAGCTACCAGAAGATTTTCTTGCTGGTACAGAGGGCAAAGGGGGAGGGGTCATCCAGGGCACTGCAAGTGAAGCCACTCTCATAGCTCTTCTTGCTGCTCGTTCCAAAATCGTCAAACTGATCCAGGCTGACCATCCTGACCAATCTGAGACAGATATTACATCCAAACTAGTCGCCTATTCATCTGATCAGGTGAGACAACAAGCCCAGATGAAAGACTGCTGCAAGGGCATATTTAACCTAAAGTACATTTTAACTAATGGTCTGCAGGATAATACACATCATTCAACAGGCACTGTGACAACTGCGTTGTGTTCTTCTATAAGTAAGGACGAGTATCTGTTAGTGGGGGCACACTCATCGGTGGAGAGAGCAGGGTTGATAGGTGGAGTGAAGATGAAGAAAATTCCCTCCGACAATAAGTTTTCTGTGCGAGGAGATGCACTGCGGAAAGTTCTAGAGGAGGACAGAGCCATGGGACTCATACCATTTTTTTTTTGTGCAACATTGGGAACAACTCCATCCTGTGCATTCGACTGCATCACTGAGCTCGGCCCTATTTGTAATGCAGAGAAAATCTGGATGCACATTGATGCCGCATATGCTGGGAGTGCATTTATCTGTCCAGAGTTCAGACCCCTCCTGAATGGCGTAGAGTTTGCAGACTCTTTTAATTTCAATCCTCATAAATGGCTCCTGGTTAACTTTGATTGCTCAGCAATGTGGGTGAAGAAAAGATCAGACATTATTGGAGCATTTAAAATGGAGCCGCTTTATCTGAAGCATGATCACCAAGAGTCAGGTAATCAATCAGTCACATCACTGCATCACTTTGCACCATATAACATTACATTTCAGTTGCTAACACAATCTTACAAATTTCGATTGGTGCACTGGCAAATTCCATTGGGACGTAGGTTCCGCTCGCTCAAGATGTGGTTTGTGTTCCGCATGTACGGACTCAAAGGTCTCCAAGCCTACATCCGCAAGCATGTAGGGTTGGCCAAAGAGTTTGAGTCTCTGGTGAGAGCTGACCAACGCTTTGAGATCTCAGCTGATGTTGTGCTGGGCCTCGTCTGCTTTAGACTCAAGGGCTCCAATGAATTAAATGAAACTCTGTTGAAGAGGATCAACAGTGCACGTAAGATCCACCTGGTTCCATGCCAACTGGCAGGCAAGTTTGTTCTGCGTTTTGCCGTGTGTGCCCGTACTACTGAGTCACGGCATGTTCAGGAGGCTTGGTGCCACATCAACCACCTGGCATCAAAGCTGCTTCAGGAACTGCCCCACTGACCACTATGGTGGGCATCACATGTTAAGTCAAATGGGTGATCTGTACCACGTCTGCTATCCACACTGTCTTACTTTCACTCTACTGCTACAATTCTTTATACTATTTATTGTCAAAATGTGCATATGTGTGTGCATGTTTGTCTCAAAGGTGTCCACCAAGAGTGCAGAGTGTCTGTCTTTTGTGAGCTGATCATGTGCGTGTTGTCTTCTGAGAGCAATGTTTTATCCAAAAAAATGTACCGTGGTGTACCAAGGAATAAAAGTGATGTCCGGAGGGGATATATGTTGTTTTTTTGTTTGTTTGTTTTTTTATGACCCTACAAGTTTGATTAAATGATCAAAATATGAGGAAAATGTTTTATAAATTTTAAATATTTTAAAGGTACACTATGTAGCTTTTGGCATCACAGTAGCCAGAGAAACTTTTCTCTATTTGCAATATGATGAGACACGAACAGGCGAGTTATGTATGTTCGCATTTTCCCGTGAAAACCATCCCAACATGTCTAAAATATAAACACTTATAATAGGCTTACCATAGTGAATCGGGGTAAAACAAAAAGGAAGAATTTTTGGCAAAAAAAGGCAATCTACAACTATAGGTTTTATTTTACTGTGCAAAATACAAATGCATTGAAAAACAAAAAGCTCACAGGAAAAAGCATACACTAACAACAACATAATCAGTTATTAATATTTCATTGTTTCTCTCTTGTTTTTGCATGTGTTCATAATTTCTTTGTATGACAGCCTGTCCAAAAAATTATGTCCGCACAATTTGTCATGTTTCATTGCTTTATCACAAATTAAACAATTGACTCCAAGCACAACTATGTAATATGATTACAAAATCATTAAATAAATCATTAATAATATTTAAATAAAGGGTGAATATATACATTTTTCTAGGCCGGACATCACTTTTGGCCACTACTGTACCTGTGCATTTGAAAATGTGTCTATATTTGGTGTCTATATGGAATATGTTTTGTAAGATATTCAGAGAATGTTTTCTCTTGAATGAGAGTATAGAGAAAGTTTTCAGACTGCTTTTACCAGAGCATTGGCCTTTATTGTTTCTCACTATGACTTTGCTCACTATTCTGCATTTTCAAAAATCAAAATCAAATATTAAATATTAAGGAATATTAATTCCTCCTTCCTTTCTTTTTCTAAAAGCATTTATCTTGACTCAGCACAGCTTCTGTGACGCGATACCTCACCACCCTTCTTTGACACAGTTATTGTGCCCAAAATGATTTGACTGGTACATATTAAACAGTATAGTGTATATGTATTGACATTCACAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_10989691_11026452.mRNA True 3033 mRNA 0.42 13 10988377 11026452

Neighbor

gene id symbol gene type direction distance location
CI01000016_10970952_10971167 NA coding downstream 17210 10970507 ~ 10971167 (-)
CI01000016_10931329_10940939 ENTPD3 coding downstream 47324 10930812 ~ 10941053 (-)
CI01000016_10897488_10911334 NA coding downstream 77043 10896186 ~ 10911334 (-)
CI01000016_10799559_10842613 SNRK, SNRKA coding downstream 144968 10799185 ~ 10843409 (-)
CI01000016_10740961_10745890 ABHD5A, ABHD5 coding downstream 242487 10739946 ~ 10745890 (-)
CI01000016_11034620_11091604 GRB10B, GRB10 coding upstream 8168 11034620 ~ 11091604 (-)
CI01000016_11161373_11165449 NA coding upstream 132916 11159368 ~ 11165449 (-)
CI01000016_11167265_11226409 COBL coding upstream 140813 11167265 ~ 11226409 (-)
CI01000016_11353238_11464979 TRIO, TRIOB coding upstream 326281 11352733 ~ 11464979 (-)
CI01000016_11670870_11794943 ADCY2A coding upstream 644366 11670818 ~ 11795083 (-)
G100516 NA non-coding downstream 6796 10981218 ~ 10981581 (-)
G100514 NA non-coding downstream 11917 10976154 ~ 10976460 (-)
G100512 NA non-coding downstream 13502 10974646 ~ 10974875 (-)
G100510 NA non-coding downstream 31350 10956755 ~ 10957027 (-)
G100508 NA non-coding downstream 34902 10952943 ~ 10953475 (-)
G100489 NA non-coding upstream 42397 11068849 ~ 11086505 (-)
G100486 NA non-coding upstream 146327 11172779 ~ 11176544 (-)
G100501 NA non-coding upstream 235095 11261547 ~ 11289191 (-)
G100491 NA non-coding upstream 251104 11277556 ~ 11300621 (-)
G100562 NA non-coding upstream 294434 11320886 ~ 11322827 (-)
G100190 NA other downstream 935988 10051168 ~ 10052389 (-)
G99178 NA other downstream 1173422 9814361 ~ 9814955 (-)
CI01000016_09510177_09512196 ID4 other downstream 1475949 9509622 ~ 9512428 (-)
G98691 NA other downstream 1730766 9256102 ~ 9257611 (-)
G98679 NA other downstream 1748448 9234996 ~ 9239929 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location