CI01000016_10897488_10911334


Basic Information

Item Value
gene id CI01000016_10897488_10911334
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 10896186 ~ 10911334 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_10897488_10911334.mRNA
AGTTTACAAAACCTTTTCTCTTTGAGATTTACGACTTGCTTGCTGACTTTATTGTACCATTTATCTTTACCACTACCTTCTCTGCTGTGTCTTTTCAGGCTCTAAGAGTGTGGTTGAAGTTCAGACTAAAATGTCGGTTTGTGGTGGCCTTCCTTTTTTTCTTCGGTCTGTCAGTGGCGATGATATGCACCCTTCCTCCCTTCCCATCTGAGCAGAGCAGGGTGAATGTACGGGGCCCCCGCAATAACAAACCCAGCAAGCTGGTCGAGAAGTGGTCTCTGAGACCTTACCTTCCAGTGTCTTCATACGGACAGAACAGCAGAACCCGGAAGAACCCTAAAATGAAAGATTCCGCTAAGCATCTCCTGATGGTCAACCATCATCAACTATCATTTTCCTCCGGAAAACAAGTTAAGGAAAAAGTATCAACCAAAAGGCCTCCAAAAAGTAAAGCAAACAAAAAAGACCGCTATCTGCAGAACACAAACAAGCGTCTAGCCAAGCCATTTGCAGCCAGTGCCAAAAAAGGGCGAGCCAGTAGACTAGGAAATAGCAGCAACTCTAACACAACCATCCATCTTCTTCGCTCCAGACATGACCCAGCTTTCCCTCAGCCTGCCAGCATCCAAAGCCTCCACCCAAATAACAAGACATGCAGGCACAAATGTGCTCCAGATGGGGACAAAGTAAAGAGGCTTGTGGGGCAGTTCTCTGATACACAGCAGGTGGTAAAACTGAAACAGGCCCCTAAAGAAGCAGGGACACATGAAAGACAAGCAGGGCCCTTTGAGAGGAAGAGGCCCAAATCCGGGGCAGAAAACAACGACAGGATTCCAGCAGAGGCTGGCATCAAAGATTCAGCCACTGACTGGTGTAAGACTGTCTCTGATGAGACTTTTATTGAAAACTGGAACCAGACCAAAGCAGAGTCTCTACCCTGGCTCAGTGAGGATGATATGAAAAAGATGGCGCTTCTCTCCAGAGGCACTGTGTTGAGCAAAGCCAGGCTACCAGGCCATGGTCAAGTGCTTCAGGTTGGATTCAGTGATAGAAATGACATTTTTGCTTCTGCAGGGGACAATCATATCAAATGCTGCCAGACAGGAAGCTGTGCTCTCATAAAACGCCCCAATGACTGGTTTGAGGTGTTCGCCTTTCACCTGGACAGAGTTCTAGGTCTGAACCGGAGCTTGCCCGCAGTGTTGAGAACATTCCACAGTGAGATTCTACCATACAGGTACACAACTGGATCTCCCAGACCGGTGGTGTGGTGGGACCCCAGCATCCAGCATTTGTCTGATGCTGAGAATGACCAGAACTCTTTTTCACTTACTTGGCCACAATATCAGACTCTGCTTAAGAGCAGGTGTGGTACTGGGGTACCGTTGAACTTTACAACATGTGTGGGAGTTCATCACTCAGAGTGGGGGCGGCTGGCCTTGTTTGACTTCCTGCTGCAGAAATGCTCTGTGGCATTCACTATGGTTCAGTGGCAGTACTGGGCTAGAACATTACGTAAGCGAGCCCTAAGGTTATCACAGTGCCGGCTGTGTGAGGAAAGAGAGCATAGATTTGAGTATGATGTTCGAGAAGAACACAATGTGAATGACAGACTGGACCGGTCTTGCTGTGGTTTCAGACCAGACCCATCAGATCTGTGTGTAGAAAACCTGCTGCATATCAAATGTAAAAACCCAAAGGACTTAAATCTGGTGCACATCCTGGTTCGGAAGACCGAACCATCCAGACTGGTTTTTATTGACAATGCAGGAAGACCTCACCAACCACAAGACAATCTCAACTTCAGACTTGTTGAAGGTATTGATGAGTAAGTATTAATACGTGTATATTTATACTATTTACAGCAGGGGTCTCCAACCCTGATCCTGGAAAGATACCTTCCCTGGAGACTTAACTTCCAAACCTTCTCCAACATGCCTGTAATTTTCAAGTAACCCTCAACTATTCGATTAGCTGGTTCAGGTGTGTTTAATTGGGGTTGGAGCTAAACTCTGCAGGATAGTAGCTCTCCAGGGTAGGGTTGTACCAGCCGTTCATAAGTTCTTACTTTATTTGGAGCTTAAAGTCAACACTAGTGCCTTAGAAACTACTAACTAGTTTGTAGCTAATCTCTGTACTTTATATGGTTGCTCCATTTGTTCTGAAGGCAGAATGTAGCTAGTGGGTTGGTGATACACAAGTAGGTGATACAAATAAATAAATAAAATATATATATATATATTTATTTTTTATAATTGATTTTATTTGCACAACATGGAACGATTCACACATAGGTGTGCTGTTTTGGTTCGTGTTAAAGAACCACTAAAAATTTATAATATATTCACACAATGTTCTCTCTTAAAATGTAAAATGTTAACATTATCATATATGTCTAAAGAATTGAAATCTATCAGGTAAAATGAGAGTTTATTGATGCATTTATGGCTTGCATTTACGGATGTGTTTATTGATGATTTTATTCCAACCATTAATCCTTGTCGGAGACTTCCGTAAATATTTAACTTATGCATGGTTACATTTCAACTTTCAAGTTTAATGGTGCAACGCAAAAAGTTGTAACTTAGTGTCCCTTTACGTCAAAACTAGACTTGCAAGCAACTTACGCACAGCTGGTGCAACCGGCCCCATGAGCAGGGTTTAAGACCCCTGGTTTACAGTGTTATTGTATAAACATATGGTGTGGCCAAGTATAAAACCAGTTAAAATGTGTTAACTATTACTACACTGTAAAAAAGAATTGTTGGTTTAACTTAAAAAAGTAAGTAACCTGGTTGCCTTGAAATTTTGAGTTCGTTGAAATTAAAATTTGAGTTAATACAATGAAGGTGATTGGTTTAATCAACAGAAATTTAAAATATTATGTTATCTGAACTACATTAATTATTTAAGTTGATTTGACAAAAGAAAAATATTGTAATAAATAATGAAAATAATTTTTTACAGTGTAGGTTTGAACCATGACTTCTTACCATTGTGCCCTTGAGCAACACACTTCATGTGTACCCAGAGGAACTATTCCTGTAAAATGCATTGCAATTACATTTGGATAAACGTGTAAAATGAATTAGAAGTAGAAAAGTTATGTTTACAGATACAAATTTTAGAATAAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_10897488_10911334.mRNA True 3134 mRNA 0.41 4 10896186 10911334

Neighbor

gene id symbol gene type direction distance location
CI01000016_10799559_10842613 SNRK, SNRKA coding downstream 52777 10799185 ~ 10843409 (-)
CI01000016_10740961_10745890 ABHD5A, ABHD5 coding downstream 150296 10739946 ~ 10745890 (-)
CI01000016_10637748_10650217 TCAIM coding downstream 245969 10637639 ~ 10650217 (-)
CI01000016_10600154_10633808 TRIM71 coding downstream 262378 10599202 ~ 10633808 (-)
CI01000016_10571262_10572444 NA coding downstream 322318 10570705 ~ 10573868 (-)
CI01000016_10931329_10940939 ENTPD3 coding upstream 19478 10930812 ~ 10941053 (-)
CI01000016_10970952_10971167 NA coding upstream 59173 10970507 ~ 10971167 (-)
CI01000016_10989691_11026452 NA coding upstream 77043 10988377 ~ 11026452 (-)
CI01000016_11034620_11091604 GRB10B, GRB10 coding upstream 123286 11034620 ~ 11091604 (-)
CI01000016_11161373_11165449 NA coding upstream 248034 11159368 ~ 11165449 (-)
G100470 NA non-coding downstream 2287 10893571 ~ 10893899 (-)
G100469 NA non-coding downstream 3069 10892877 ~ 10893117 (-)
G100347 NA non-coding downstream 132302 10753614 ~ 10763884 (-)
G100358 NA non-coding downstream 146589 10746849 ~ 10749597 (-)
G100346 NA non-coding downstream 158814 10736953 ~ 10737372 (-)
G100508 NA non-coding upstream 41609 10952943 ~ 10953475 (-)
G100510 NA non-coding upstream 45421 10956755 ~ 10957027 (-)
G100512 NA non-coding upstream 63312 10974646 ~ 10974875 (-)
G100514 NA non-coding upstream 64820 10976154 ~ 10976460 (-)
G100516 NA non-coding upstream 69884 10981218 ~ 10981581 (-)
G100190 NA other downstream 843797 10051168 ~ 10052389 (-)
G99178 NA other downstream 1081231 9814361 ~ 9814955 (-)
CI01000016_09510177_09512196 ID4 other downstream 1383758 9509622 ~ 9512428 (-)
G98691 NA other downstream 1638575 9256102 ~ 9257611 (-)
G98679 NA other downstream 1656257 9234996 ~ 9239929 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location