CI01000016_11277549_11278592


Basic Information

Item Value
gene id CI01000016_11277549_11278592
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 11276555 ~ 11278855 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_11277549_11278592.mRNA
CTATATATGTAGGACGCATTACAGTTTTCTATTTGTGCAAAAAGGAGTTTAATAAATGTTAAATAACAAATTAAAGGTCAGCACCATCCTTGTCTGATGATTCAACCACCACTGCCTCTGAACAATTGGATTCCGACCATTTTACAACCGTCTTCCCAGAATGACAGATAACGCTGCACCGTAACCCTAAGAGGGTGTTTTAACACTTTGAAATATTTGTAGTTGTAAAAGTTAAAAGAAGATACTTAAAATATCCTACTGGAAATGTGCAGTTTTACCTATTGCACTTACATCCACATTTCAAATGAATGAATTTAATGATACAAACAGCTATGTAAACTTTTTTTAATGCCATACAAGTGCAACTACATTAAATATGCGTAACTTTTTAGTGAGAAGTCCCGCCTGTGGGAGGTTCAGGAAATAGCACCTCCTGTGCTTTGTAAAGCGTTTTGACAGACACACAAATTTCACAGATTCAGCTATCTTTACAAAGAGACATGACAGAGGACCCAGGGACTGTGGCTGGTAGGTCGTACAATCTATTCAGTGTAATTATGCTACATTCAAAAAAAAAAATAATAATAATAATACAAAAGTTGTTCTTAATTAAAATTAGGACATTAGATTTTTTATTATTATTATTATTGTGATTTTTTTTTCACAGCATTCATTAAAATTTCAAAAATCGAAAATCAAACCATTAAAACATTTAAAACAGCATTATTATGATACGTATTTAAACATGAAAAAGTATAACATTTCATCTAGACACTACTCTGACCAGTAGATATCATGAAAAAACTAAAATTCAAGTCTGTTAGGAGTTCCTGCTTGTGTCATTTTATTTTGTCTACCTTTAAAACTAAAGAAATGTTGAACCAATGTTAAGGTTTCAGAATATATTATTAAGCATATTATACACATAGCCTACTATATTATAAATATATTATATGACTTATCATTGTGTTCTTTGTGTGCCCTCCAAAATACAATGACAGAAAACTTTGATGAATACTATAACCAAGACGGTTCCGGAACACCATGCAATAATGGCAACACAAAGGCCTTCAGTGAAGTTTTCCTCCCCACCCTGTACAGCATAGTTTTCATTCTTGGCTTCATTGGAAACAGCCTGGTAGTGTGGGTCCTGATCAGATACCGTCAAAAATCCAATATGACAGATGTGTGCCTCTTCAACCTAGCTCTATCGGACCTAATCTTTCTTGTGTCACTCCCTTTTTGGGCTCATGGTTCCATAGATGAGTGGATTTTCGGCAAATTCATGTGTCATACCATAACAGGTCTCTTCATGATAGGTCTCTATGGCAGCATCTTCTTCATGGTCCTTATGACACTGGATCGCTATGTCGTCATCGTCCATGCCCACAGTATCTTTTCCAGAAATCGGTCTTCAAAAATGGGTTTGATTCTCGCCTCATTTATATGGATACTCAGTCTGCTTGCATCCCTCCCTAATATTATTTTTGCCAAAGTGGATAATGAGACAAGCGTCAAAACATCCTGTGGATCAGATTTTCCTGAAGGTACAGCCTGGATGTCATTTACTTACCTTCAGATGAATTTCCTGAGCTTGATTATCCCTCTGATTATTATGAGCTTTTGCTATTCCCGGATCATCCCCACTCTGCTCAGCATAAAATCACAAAAAAGGCACAAAGTCATCAGACTCATCCTGGCTGTGGTGGCAGTTTATTTCCTCTTCTGGACTCCATACAACATTGTCATGTTTCTCATGTTCCTGCAGAGGAAAGGTTACTTGTTTTCTTGCGAATTGCATAGTAATTTGAGCCTTGCCATGCAGTGGGTGGAAACTATCGCCTTAAGCCACTGTTGCCTCAACCCTATCATCTATGCCTTTGCCGGACAGAAGTTCAGAAGAGCAGTTCTTAAAGTCCTAAAAGAGCAGTTTCCTTTGTGCTTCAGCCAATGTACAAATTTCTCTCGACAGTTATCTGAACGCAGAAGCTCAGTCTTCTCCAGAACTTCTGAATATTCCTCCACACAAATTGCATAGAAAACAGGTTCCTCCAGAGAATTATTTTCATTCTGAGCTCCTATTTTTGCTATCCCTAAGTTCCCCTTTTTATTGAATGTATCGAGTCTTTGTTCTGTTTTTTGACAATTTTGTTTGACAATGATGTATGTTAAGTAAGAGAATGCAGAATTTGACACGGTTGCTAAGATGTTCTTTCTTGTGCGTGTATATTGCTTATATTGGAGATTTGCAAATGATACCGACAATAGTTGTCATATGAATGATTTCATCAGCAATTTTAA

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K04180 CCR5, CD195; C-C chemokine receptor type 5

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_11277549_11278592.mRNA True 2301 mRNA 0.37 1 11276555 11278855

Neighbor

gene id symbol gene type direction distance location
CI01000016_10967556_10968779 NA coding upstream 307240 10967556 ~ 10969416 (+)
CI01000016_10881609_10887779 NA coding upstream 388658 10881461 ~ 10887897 (+)
CI01000016_10865834_10867561 POMGNT2 coding upstream 408907 10865349 ~ 10867648 (+)
CI01000016_10760640_10783664 ANO10A, ANO10 coding upstream 492696 10760640 ~ 10783859 (+)
CI01000016_10756608_10758149 NA coding upstream 518354 10754393 ~ 10758201 (+)
CI01000016_11298638_11300240 NA coding downstream 18815 11297670 ~ 11300506 (+)
CI01000016_11311430_11313782 NA coding downstream 32026 11310881 ~ 11314080 (+)
CI01000016_11330944_11334103 NA coding downstream 51358 11330213 ~ 11334466 (+)
CI01000016_11344848_11345696 NA coding downstream 65597 11344452 ~ 11345869 (+)
CI01000016_11499086_11499455 NA coding downstream 220023 11498878 ~ 11499609 (+)
G99781 NA non-coding upstream 119951 11151614 ~ 11156604 (+)
G99780 NA non-coding upstream 125395 11150853 ~ 11151160 (+)
G99779 NA non-coding upstream 125811 11150438 ~ 11150744 (+)
G99761 NA non-coding upstream 184807 11089099 ~ 11091748 (+)
G99738 NA non-coding upstream 219979 11053194 ~ 11056576 (+)
G99853 NA non-coding downstream 41909 11320764 ~ 11321655 (+)
G99854 NA non-coding downstream 42904 11321759 ~ 11322603 (+)
G99865 NA non-coding downstream 48440 11327295 ~ 11327387 (+)
G99873 NA non-coding downstream 70200 11349055 ~ 11349267 (+)
G99864 NA non-coding downstream 78167 11357022 ~ 11360234 (+)
G99456 NA other upstream 977651 10294391 ~ 10298904 (+)
G99410 NA other upstream 1039704 10234400 ~ 10236851 (+)
G99041 NA other upstream 1350901 9924418 ~ 9925654 (+)
CI01000016_09796196_09842235 NA other upstream 1479615 9795950 ~ 9842576 (+)
G98288 NA other upstream 2273838 8996098 ~ 9002717 (+)
G99940 NA other downstream 392790 11671645 ~ 11672873 (+)
G100178 NA other downstream 881786 12160641 ~ 12162845 (+)

Expression


Co-expression Network