G99738


Basic Information

Item Value
gene id G99738
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 11053194 ~ 11056576 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU113480
CTTAAATGTTATTTTACATATTGTAGGTAGATGTGGCGGTAGAGAAAAAAATAAGTTTATGTATGTGTGTGGGGACTTAAGGGTCTTGTTTTTCAAAACCGCTGTAAAAACATTCTGAAGAACTGTTAGCTTAAATAAAAATAGGAAGCGGTCACAGAGAGCGCCTGCATGTCGCCCACAAGCTTGACCAATGCTAAAGCTAGCAGCAGGGCAGTCTTTAGCAACAGGGGCCACAATCCAGCCACTTGGAGCGGCTTGAACGGAGGGCCTCGAAGGGCCCTAAGGACCATGGACAGGTCCTAGATCGGGTCAGTATGAGGGCAAAGCAGGTTAAGTCTCCTGGCTCCCCTCAAGAACTTGACGACAAAGTCGTTCCTTCCTACAGACTGGCCGGCCACCAGGGTGTGATTCGCCGCGATGGCTGCCACATATACTTTTGAGCGTGGAAGGGGTATGCCCCTTATACAGCAGCTCCTGTAAGAATGACAGAATGGCTGATACATCACAAGTGGATGGGTCTTCATTCCGGACTGCACACCAGTCGGAGAAGACAGACCATTTAAGGATATAGAGGCGCTTTGTAGACGGCACTCTGGCCTCCGCTATAGTACTGGCCACCCTTACAGGGAGCTGCAAAGGCTGAGAGAAAAGGTCTTTCATCAGCGGAATTGGCCACGGAGCTGTCGATGACAGCTGTATCAGCTCGGGGAACCACGACTGGTTTCGCCAGAGTGGAGCCACCTAGAGAACTGACAACATGCCGGGCACGTGCACCGCCCCTCAAAGAGCCCAGATTGCACTGTGCCCATAGGAGGAGGCGTCTCGATATCTTGTAAAGAGACCATGACCTGAGGCCGCTCTGATGATTTATGAAGACCACCATCTTCATGTTGTGGTACCCCTGTTGGGCTGGCAGGAAGGTTTTGAGAGCCAGAAAAACCGCCATAATTTCGAGGCTGTTAATATGCAGGCATTTCTCCAGGCTGGAGCAGGAGCCGAATGCCGGGATGCCCTCGCACAGAGCTCCCCAACCCGAGTTGGAGGTATCTGTCCTGACAACTTTCCATCTGGAGGTCAGTCCCAATTGGATGCCTGTCTGATATAGGCAAGAGTCCTTCCAAGGGGCCACAGCTTTGTCACAATGATGGTCCACCTTGAGACACAAACCTCCCTGATGCCAACTGTGGGACAGGACTCGGGCTTTCAGCCAATATTGCAGGAGCTGCATATCAAGTTACTTCACCTTTATTTATATAACGCTTTTAACAATACAGATTGTTTCAAAGCAGCTTTACAGTGATAACAGGAAAATAATGCAACAAAGTTTGTTTTGGCTTTACAGCAGCTCTAGAAGAAAATAGCGTCATTGTCCAACTTAAGTTCAGTGTTGATTCATTTCTGTTGTAAAAAAGTTAGTTCATTTATCTTTACAGCAGCTCTGGAGAAAACAGTGATGGCTCAGTTGTCCAGCTCATTTCAGTTCTCATACAATGGTCTCAATGCAGGCAGATCAATAATGTTGAATATTAAGAGTCCCCAACTAAGCAAGCCAGAGGCGACAGTGGCAAGGAACCCAAACTCCATCAGGTGACAGAATGGAGAAGAAAACCTTAGGAGAAACCAGGCTCAGTCTGGGTGCCAGTTCTCCTCTGGCTAACAAACGAACAGTGCATGATTATGATTCAGGCAGCATTACAGGCCAGAAGTCAGATTGGAACGGAACATTCAAAATATTTAATCCAGTTCTGTCGTGGGGATAGTCTAGTTGACACAATCTCGGCTGTCACTTCAGGGATGCGCTGTGGTCGTGTCTAGGCGCAGGTCCTCCATCTGATCTGGATACGGCCCGGAGATGGCTGACTACAGTTGGGATAAACAGAGTGACTAATATTAGTGTAGATGCCATTCTTCTTATGATGTAACAAGTACATCAGGTGTTATAGGAAGTGTTCCCAGTTCCGGCTAACCTAATTTATTCAGCCTAACAATCATTTAACTGATTTGAATAATACAAATTGATAATGGTATCCATTGGCCCATTCGTACTACAGAGGAGGCGGCTGCCATCAGGCCGAGCAACCTCTGGAAAGCTTTGAGGGGAAGGAAAGCCGCAACTTTGAAAGACGGCGCTAGCCACTGAATAGTCAGTGAGCGTTCCAGCATGAGCTAGGCCCGCATCTTGGCCGAGTCGATAACTGCCCCCAGGAAAATGACTCGCCTGCTGGGAGACAGGAAGCTCTTGAATGAATTGCAGTGACCTGTGAGCACAGAGCTGGAGAGAGACTGACAGTACACCACAGTTATACAAATGAACTAGATCAATGCATTTATTTTCCTCCAAAGGGATAGAAACGGATAGAAAAAGATTAGACTTAAAAGATTCCTTCTCCTGTGAGATTCCTTATTCCTTATCCTACTCCCTCAAGTGGACGACATTAATATAAGAGCCTTCATTTTTCAGTTGAAATGGCTGAGTGTTTAGAATTTGCTGTTAGCCTCCCAGTAACAATAAATTCATGAAACTAAGCATGTTTTCTTAGAATGATTTGTTCTCCCATATGTACAAAATTTTGAGAAGTTTGGACTTTGTGCACACAAGATATAGACATAATAGTAATAATAATGGGTCACATAATAAATTGTATCAAGTAAACTGTTTAATAGATCAAAATTCTTTTGATAACTTTTAGCCAGCATGGTCAGCTGATGTGTGCAAAGTTTATTGAAGGTCTGACTAATGGCCTAGGAGGAGTTTAAAAAAAAAAAGTAGTACTTTTTTAACAGTTTAGAATGGCGAATAAAGTTTTTAGATAATCATAAAAATTTGATTTACTATTTTTTGGGCGTAAAGCAAGGATTCAGAAGAAATACAAATTTCTGTCACACATGGCTGCAGAGCCATTAGCTAAAAAGTAAAGTTGCTTATTATAGTGCCACCTTGAGGCTTATTTTCAAAAAAATCGGTACACATTCATTGGCAGCTGAAATTTGATTGAAATGCTTTGACAAATCAAAATTTGTTGATTCACTTTTGCCAGCACTTTTTGCCAGCATTTGGCTGATACTTGATGCAACAATTGTGGGTGTCAACGCAAAGTCGATTTTGGTTTAAGCTGATTTAATATTTAATGTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113480 True 3135 lncRNA 0.44 2 11053194 11056576

Neighbor

gene id symbol gene type direction distance location
CI01000016_10967556_10968779 NA coding upstream 83879 10967556 ~ 10969416 (+)
CI01000016_10881609_10887779 NA coding upstream 165297 10881461 ~ 10887897 (+)
CI01000016_10865834_10867561 POMGNT2 coding upstream 185546 10865349 ~ 10867648 (+)
CI01000016_10760640_10783664 ANO10A, ANO10 coding upstream 269335 10760640 ~ 10783859 (+)
CI01000016_10756608_10758149 NA coding upstream 294993 10754393 ~ 10758201 (+)
CI01000016_11277549_11278592 NA coding downstream 219979 11276555 ~ 11278855 (+)
CI01000016_11298638_11300240 NA coding downstream 241094 11297670 ~ 11300506 (+)
CI01000016_11311430_11313782 NA coding downstream 254305 11310881 ~ 11314080 (+)
CI01000016_11330944_11334103 NA coding downstream 273637 11330213 ~ 11334466 (+)
CI01000016_11344848_11345696 NA coding downstream 287876 11344452 ~ 11345869 (+)
G99711 NA non-coding upstream 63314 10988365 ~ 10989880 (+)
G99709 NA non-coding upstream 71611 10981360 ~ 10981583 (+)
G99702 NA non-coding upstream 82929 10970026 ~ 10970265 (+)
G99698 NA non-coding upstream 85984 10966941 ~ 10967210 (+)
G99761 NA non-coding downstream 32523 11089099 ~ 11091748 (+)
G99779 NA non-coding downstream 93862 11150438 ~ 11150744 (+)
G99780 NA non-coding downstream 94277 11150853 ~ 11151160 (+)
G99781 NA non-coding downstream 95038 11151614 ~ 11156604 (+)
G99853 NA non-coding downstream 264188 11320764 ~ 11321655 (+)
G99456 NA other upstream 754290 10294391 ~ 10298904 (+)
G99410 NA other upstream 816343 10234400 ~ 10236851 (+)
G99041 NA other upstream 1127540 9924418 ~ 9925654 (+)
CI01000016_09796196_09842235 NA other upstream 1256254 9795950 ~ 9842576 (+)
G98288 NA other upstream 2050477 8996098 ~ 9002717 (+)
G99940 NA other downstream 615069 11671645 ~ 11672873 (+)
G100178 NA other downstream 1104065 12160641 ~ 12162845 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location