G94911


Basic Information

Item Value
gene id G94911
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 2838351 ~ 2838598 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU108005
GACGGGTCACTGCTTCATCATCACAAAAGTTTCAGACTTTCCAATGTAAATATTCAAGTGCTGGAACAAGGAAAGGGAATTTGTTACTCACGCGCTGTGTGTTTAGTGTTGCCAAGTCCGTGGTTTTCCCGCGGAATTGGGCTACTTTTACACTGTTGCCACTGTTTTTCATGTCCTTGGGTTGAAGCAATCCCAAATAACATGATATTTAGGCCCTGGAATGCGATTTTCACCAGGGGAACCCCGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU108005 True 248 lncRNA 0.45 1 2838351 2838598

Neighbor

gene id symbol gene type direction distance location
CI01000016_02793868_02796984 EVA1BA coding upstream 41018 2793868 ~ 2797333 (+)
CI01000016_02741163_02753993 STK40 coding upstream 84298 2741163 ~ 2754053 (+)
CI01000016_02722831_02730864 OSCP1B, OSCP1 coding upstream 106773 2722831 ~ 2731578 (+)
CI01000016_02719966_02722011 MRPS15, PL8L1 coding upstream 116160 2719966 ~ 2722191 (+)
CI01000016_02714495_02719654 NA coding upstream 118605 2714412 ~ 2719746 (+)
CI01000016_02876373_02882129 NA coding downstream 37589 2876187 ~ 2882148 (+)
CI01000016_02918064_02918435 NA coding downstream 79166 2917764 ~ 2918540 (+)
CI01000016_02965137_02979305 SCMH1 coding downstream 126539 2965137 ~ 2979509 (+)
CI01000016_03050072_03055313 CTPS1A, CTPS1, CTPS1B coding downstream 209944 3048542 ~ 3055370 (+)
CI01000016_03056468_03058753 TAF12 coding downstream 217870 3056468 ~ 3059289 (+)
G94910 NA non-coding upstream 20 2838129 ~ 2838331 (+)
G94909 NA non-coding upstream 419 2837707 ~ 2837932 (+)
G94908 NA non-coding upstream 2646 2835392 ~ 2835705 (+)
G94906 NA non-coding upstream 6282 2830740 ~ 2832069 (+)
G94858 NA non-coding upstream 16135 2817387 ~ 2822216 (+)
G94915 NA non-coding downstream 6671 2845269 ~ 2845541 (+)
G94917 NA non-coding downstream 9720 2848318 ~ 2848543 (+)
G94928 NA non-coding downstream 40084 2878682 ~ 2878914 (+)
G94955 NA non-coding downstream 92502 2931100 ~ 2931323 (+)
G94956 NA non-coding downstream 92820 2931418 ~ 2931633 (+)
G93406 NA other upstream 1910819 905400 ~ 927532 (+)
G95439 NA other downstream 1023577 3862175 ~ 3862305 (+)
G95648 NA other downstream 1434038 4272636 ~ 4273905 (+)
CI01000016_04829592_04837305 NA other downstream 1995960 4829592 ~ 4837457 (+)
G95792 NA other downstream 2381282 5219880 ~ 5225941 (+)
CI01000016_05405791_05407797 AICDA other downstream 2567271 5405791 ~ 5407963 (+)

Expression


Co-expression Network