G94928


Basic Information

Item Value
gene id G94928
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 2878682 ~ 2878914 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU108022
TGCAGCAAGGCATGAAAGAGAGCTCCCTTTGCGCCGCTGTCTGAGAGACGTGGCTTTCAGGTTGCGTGCTTCGGATGTTAAACTTCCCACACAGAAAGGGTTGCCAGGTTGCCGAATCCATGTTTTTGCCGGGGTTCCCCAGAAGCTTCCTTCAGAAGCTAAACAAGTGACTGTTAACTATGACAGGATGATTGACAGGCCAGTTTACAGTATAGTGGTAGTGTATCCCAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU108022 True 233 lncRNA 0.49 1 2878682 2878914

Neighbor

gene id symbol gene type direction distance location
CI01000016_02793868_02796984 EVA1BA coding upstream 81349 2793868 ~ 2797333 (+)
CI01000016_02741163_02753993 STK40 coding upstream 124629 2741163 ~ 2754053 (+)
CI01000016_02722831_02730864 OSCP1B, OSCP1 coding upstream 147104 2722831 ~ 2731578 (+)
CI01000016_02719966_02722011 MRPS15, PL8L1 coding upstream 156491 2719966 ~ 2722191 (+)
CI01000016_02714495_02719654 NA coding upstream 158936 2714412 ~ 2719746 (+)
CI01000016_02918064_02918435 NA coding downstream 38850 2917764 ~ 2918540 (+)
CI01000016_02965137_02979305 SCMH1 coding downstream 86223 2965137 ~ 2979509 (+)
CI01000016_03050072_03055313 CTPS1A, CTPS1, CTPS1B coding downstream 169628 3048542 ~ 3055370 (+)
CI01000016_03056468_03058753 TAF12 coding downstream 177554 3056468 ~ 3059289 (+)
CI01000016_03158359_03165518 NA coding downstream 279445 3158359 ~ 3165822 (+)
G94917 NA non-coding upstream 30139 2848318 ~ 2848543 (+)
G94915 NA non-coding upstream 33141 2845269 ~ 2845541 (+)
G94911 NA non-coding upstream 40084 2838351 ~ 2838598 (+)
G94910 NA non-coding upstream 40351 2838129 ~ 2838331 (+)
G94909 NA non-coding upstream 40750 2837707 ~ 2837932 (+)
G94955 NA non-coding downstream 52186 2931100 ~ 2931323 (+)
G94956 NA non-coding downstream 52504 2931418 ~ 2931633 (+)
G94958 NA non-coding downstream 55392 2934306 ~ 2934953 (+)
G94977 NA non-coding downstream 108424 2987338 ~ 2987550 (+)
G94978 NA non-coding downstream 109683 2988597 ~ 2988808 (+)
G93406 NA other upstream 1951150 905400 ~ 927532 (+)
G95439 NA other downstream 983261 3862175 ~ 3862305 (+)
G95648 NA other downstream 1393722 4272636 ~ 4273905 (+)
CI01000016_04829592_04837305 NA other downstream 1955644 4829592 ~ 4837457 (+)
G95792 NA other downstream 2340966 5219880 ~ 5225941 (+)
CI01000016_05405791_05407797 AICDA other downstream 2526955 5405791 ~ 5407963 (+)

Expression


Co-expression Network