G94978


Basic Information

Item Value
gene id G94978
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 2988597 ~ 2988808 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU108082
GTGTTACCCTTACAACTTGTTTACACTGTACTCATGTACAGTCCAAGCATCAAAACATCTAGGTCATTCCACAAAACAAGTGCCTGTTTTAAGTTTCAAAAAGGCTTGGAACATTCTGACATACAAAATGTTTTTACGTCTTAAGAAAATAATAAATATTAATGTACACTACCGTTCAAAAGATTTCTTTGTGTTTGAAAGAAGTCTGTTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU108082 True 212 lncRNA 0.32 1 2988597 2988808

Neighbor

gene id symbol gene type direction distance location
CI01000016_02965137_02979305 SCMH1 coding upstream 9088 2965137 ~ 2979509 (+)
CI01000016_02918064_02918435 NA coding upstream 70057 2917764 ~ 2918540 (+)
CI01000016_02876373_02882129 NA coding upstream 106449 2876187 ~ 2882148 (+)
CI01000016_02793868_02796984 EVA1BA coding upstream 191264 2793868 ~ 2797333 (+)
CI01000016_02741163_02753993 STK40 coding upstream 234544 2741163 ~ 2754053 (+)
CI01000016_03050072_03055313 CTPS1A, CTPS1, CTPS1B coding downstream 59734 3048542 ~ 3055370 (+)
CI01000016_03056468_03058753 TAF12 coding downstream 67660 3056468 ~ 3059289 (+)
CI01000016_03158359_03165518 NA coding downstream 169551 3158359 ~ 3165822 (+)
CI01000016_03190518_03261836 NA coding downstream 201358 3190166 ~ 3262243 (+)
CI01000016_03267301_03268376 NA coding downstream 276337 3265145 ~ 3268391 (+)
G94977 NA non-coding upstream 1047 2987338 ~ 2987550 (+)
G94958 NA non-coding upstream 53644 2934306 ~ 2934953 (+)
G94956 NA non-coding upstream 56964 2931418 ~ 2931633 (+)
G94955 NA non-coding upstream 57274 2931100 ~ 2931323 (+)
G94928 NA non-coding upstream 109683 2878682 ~ 2878914 (+)
G94988 NA non-coding downstream 35351 3024159 ~ 3024430 (+)
G94991 NA non-coding downstream 39072 3027880 ~ 3028216 (+)
G95003 NA non-coding downstream 54203 3043011 ~ 3043218 (+)
G94972 NA non-coding downstream 73746 3062554 ~ 3070931 (+)
G95007 NA non-coding downstream 103730 3092538 ~ 3092777 (+)
G93406 NA other upstream 2061065 905400 ~ 927532 (+)
G95439 NA other downstream 873367 3862175 ~ 3862305 (+)
G95648 NA other downstream 1283828 4272636 ~ 4273905 (+)
CI01000016_04829592_04837305 NA other downstream 1845750 4829592 ~ 4837457 (+)
G95792 NA other downstream 2231072 5219880 ~ 5225941 (+)
CI01000016_05405791_05407797 AICDA other downstream 2417061 5405791 ~ 5407963 (+)

Expression


Co-expression Network