G95007


Basic Information

Item Value
gene id G95007
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 3092538 ~ 3092777 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU108111
CTGTAATTACTTTTAACATTCTGAATGTTTACCACCAGATGGCAATAAAACATTAAGAAACAGCTGAATGATATGGCATGACAATCCTGTTGTATATGGTCTGACATGCTAAAAATGTCAACATATCTGTCTCCCAGACAGATTACATTCCATGTAAGTTTATACTTAAAATAGAGATCATTCTGCTCCCAGTAAGAGATCACAACCTTCAGACTGTTTTCTCTCACAACAGTGTTTAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU108111 True 240 lncRNA 0.35 1 3092538 3092777

Neighbor

gene id symbol gene type direction distance location
CI01000016_03056468_03058753 TAF12 coding upstream 33249 3056468 ~ 3059289 (+)
CI01000016_03050072_03055313 CTPS1A, CTPS1, CTPS1B coding upstream 37168 3048542 ~ 3055370 (+)
CI01000016_02965137_02979305 SCMH1 coding upstream 113029 2965137 ~ 2979509 (+)
CI01000016_02918064_02918435 NA coding upstream 173998 2917764 ~ 2918540 (+)
CI01000016_02876373_02882129 NA coding upstream 210390 2876187 ~ 2882148 (+)
CI01000016_03158359_03165518 NA coding downstream 65582 3158359 ~ 3165822 (+)
CI01000016_03190518_03261836 NA coding downstream 97389 3190166 ~ 3262243 (+)
CI01000016_03267301_03268376 NA coding downstream 172368 3265145 ~ 3268391 (+)
CI01000016_03503738_03504907 NA coding downstream 410895 3503672 ~ 3504907 (+)
CI01000016_03546616_03553250 TUFT1A coding downstream 453839 3546616 ~ 3553749 (+)
G94972 NA non-coding upstream 21607 3062554 ~ 3070931 (+)
G95003 NA non-coding upstream 49320 3043011 ~ 3043218 (+)
G94991 NA non-coding upstream 64322 3027880 ~ 3028216 (+)
G94988 NA non-coding upstream 68108 3024159 ~ 3024430 (+)
G94978 NA non-coding upstream 103730 2988597 ~ 2988808 (+)
G95033 NA non-coding downstream 176205 3268982 ~ 3295166 (+)
G95339 NA non-coding downstream 260634 3353411 ~ 3353772 (+)
G95341 NA non-coding downstream 264841 3357618 ~ 3357821 (+)
G95349 NA non-coding downstream 278057 3370834 ~ 3371077 (+)
G95350 NA non-coding downstream 278449 3371226 ~ 3371587 (+)
G93406 NA other upstream 2165006 905400 ~ 927532 (+)
G95439 NA other downstream 769398 3862175 ~ 3862305 (+)
G95648 NA other downstream 1179859 4272636 ~ 4273905 (+)
CI01000016_04829592_04837305 NA other downstream 1741781 4829592 ~ 4837457 (+)
G95792 NA other downstream 2127103 5219880 ~ 5225941 (+)
CI01000016_05405791_05407797 AICDA other downstream 2313092 5405791 ~ 5407963 (+)

Expression


Co-expression Network