G95339


Basic Information

Item Value
gene id G95339
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 3353411 ~ 3353772 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU108456
CTTTGGCAGTTTGATACACGCGCCGAACCACTGATTCGAAACAAAAGATTTGTAAAGCTTCGAAGCAGTGTTTTGAAATCGCCCATCTCTAGATATTATTGAATAAAGTTTTTTGTCGCACAAAAAGTATTCTTGTCGCTTCATAACATTAAGGTTGAACCACTGTAGTCACATGAACTGTTTTATATGTCTTTAGTAGCTTTCTGGGCATTTGAAAGTGTTAATTATCTTGCTGTCAATGGAGGCCTCACTGAGCCATCGGATTTTATCAAAAATATCTTAATTTGTGTTCTGAAGATGAACGAAGGTCTTACGGGTGTAGAACGACATGAGGGTGAGTAATTAATGACAGAATTTTCATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU108456 True 362 lncRNA 0.37 1 3353411 3353772

Neighbor

gene id symbol gene type direction distance location
CI01000016_03267301_03268376 NA coding upstream 85020 3265145 ~ 3268391 (+)
CI01000016_03190518_03261836 NA coding upstream 91168 3190166 ~ 3262243 (+)
CI01000016_03158359_03165518 NA coding upstream 187589 3158359 ~ 3165822 (+)
CI01000016_03056468_03058753 TAF12 coding upstream 294122 3056468 ~ 3059289 (+)
CI01000016_03050072_03055313 CTPS1A, CTPS1, CTPS1B coding upstream 298041 3048542 ~ 3055370 (+)
CI01000016_03503738_03504907 NA coding downstream 149900 3503672 ~ 3504907 (+)
CI01000016_03546616_03553250 TUFT1A coding downstream 192844 3546616 ~ 3553749 (+)
CI01000016_03559585_03560912 NA coding downstream 205554 3559326 ~ 3561090 (+)
CI01000016_03565923_03571228 NA coding downstream 211228 3565000 ~ 3571637 (+)
CI01000016_03572467_03575117 AQP10A coding downstream 218695 3572467 ~ 3575187 (+)
G95033 NA non-coding upstream 58245 3268982 ~ 3295166 (+)
G95007 NA non-coding upstream 260634 3092538 ~ 3092777 (+)
G94972 NA non-coding upstream 282480 3062554 ~ 3070931 (+)
G95003 NA non-coding upstream 310193 3043011 ~ 3043218 (+)
G94991 NA non-coding upstream 325195 3027880 ~ 3028216 (+)
G95341 NA non-coding downstream 3846 3357618 ~ 3357821 (+)
G95349 NA non-coding downstream 17062 3370834 ~ 3371077 (+)
G95350 NA non-coding downstream 17454 3371226 ~ 3371587 (+)
G95369 NA non-coding downstream 40523 3394295 ~ 3394581 (+)
G95374 NA non-coding downstream 47521 3401293 ~ 3402302 (+)
G93406 NA other upstream 2425879 905400 ~ 927532 (+)
G95439 NA other downstream 508403 3862175 ~ 3862305 (+)
G95648 NA other downstream 918864 4272636 ~ 4273905 (+)
CI01000016_04829592_04837305 NA other downstream 1480786 4829592 ~ 4837457 (+)
G95792 NA other downstream 1866108 5219880 ~ 5225941 (+)
CI01000016_05405791_05407797 AICDA other downstream 2052097 5405791 ~ 5407963 (+)

Expression


Co-expression Network