G95649


Basic Information

Item Value
gene id G95649
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 4371581 ~ 4371833 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU108787
TTTATATATATAGATAATAATCAGATTCAATGAACTATGCTTAGCTATGCTAAAAGTGGTACCACCAGACCCGGAGATCGGCTGAATGGATTCGAAAACGGTAAAACTCAACTGTTTAACTCTAGGGGAGTTGGAAAATGAGCCTATTTTCAAAAAAGGTGGAGTGTTCCTTTAAGATATTTGGATGAGATACAACTATTTGACAATATGGAATCTGAGGGTGCAAAAAAATCAAAATATTGAGAAAATCGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU108787 True 253 lncRNA 0.35 1 4371581 4371833

Neighbor

gene id symbol gene type direction distance location
CI01000016_04365155_04367358 NA coding upstream 3634 4364285 ~ 4367947 (+)
CI01000016_04321053_04331396 NA coding upstream 39342 4321053 ~ 4332239 (+)
CI01000016_04246693_04261518 VARS2, VARS coding upstream 109952 4246693 ~ 4261629 (+)
CI01000016_04234275_04238405 INO80E coding upstream 133080 4234275 ~ 4238501 (+)
CI01000016_04212233_04219411 NA coding upstream 151812 4211797 ~ 4219769 (+)
CI01000016_04400456_04412173 ATP1A3A, ATP1A3B, ATP1A3 coding downstream 28623 4400456 ~ 4413072 (+)
CI01000016_04428669_04441464 DEDD1 coding downstream 56836 4428669 ~ 4441464 (+)
CI01000016_04491680_04506535 POU2F2A coding downstream 119543 4491376 ~ 4506806 (+)
CI01000016_04507602_04509233 NA coding downstream 135102 4506935 ~ 4509233 (+)
CI01000016_04557546_04579200 NA coding downstream 185713 4557546 ~ 4579501 (+)
G95445 NA non-coding upstream 189640 4077383 ~ 4181941 (+)
G95626 NA non-coding upstream 370481 4000781 ~ 4001100 (+)
G95623 NA non-coding upstream 377500 3993806 ~ 3994081 (+)
G95622 NA non-coding upstream 378107 3993274 ~ 3993474 (+)
G95621 NA non-coding upstream 378320 3993037 ~ 3993261 (+)
G95650 NA non-coding downstream 1153 4372986 ~ 4373220 (+)
G95659 NA non-coding downstream 46055 4417888 ~ 4418614 (+)
G95673 NA non-coding downstream 145043 4516876 ~ 4517094 (+)
G95485 NA non-coding downstream 165847 4537680 ~ 4546072 (+)
G95648 NA other upstream 97676 4272636 ~ 4273905 (+)
G95439 NA other upstream 507724 3862175 ~ 3862305 (+)
G93406 NA other upstream 3444049 905400 ~ 927532 (+)
CI01000016_04829592_04837305 NA other downstream 462725 4829592 ~ 4837457 (+)
G95792 NA other downstream 848047 5219880 ~ 5225941 (+)
CI01000016_05405791_05407797 AICDA other downstream 1034036 5405791 ~ 5407963 (+)
G96389 NA other downstream 2788808 7160641 ~ 7161290 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other downstream 3412232 7783987 ~ 7784996 (+)

Expression


Co-expression Network