G100352


Basic Information

Item Value
gene id G100352
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 10665429 ~ 10681706 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU114191
AGGGTGAGGCTACCGATCTCATTCTCCTGGAGCGTGTGAGTGTGTGAGTGAAGGTAGGAAGCAAGGATGGAGAAAGAAACATAGTTAGTGAACAAGAGCAAGAGGAAGGAAGTATGAAAGAGAGTGTGTGTGAGATCAGAGCTGGGAAGCTCATGGAAGCGACGGGACACAATCAACACCACTGTCTGCAAAGATCACGAGGGTATCCGAGGGCAGTCAGAATGGCGCTTCCCGAATGATGTTACACAAGACTGTGGATCCTCTAAAGTGTAAGTATATTGCAATAATAATATCTAATTTTTCCCATATTTTAATGATTTTCTTGCATAAAACCAACCCATATTCATCACTAAAAATCTCATAAAGACGTAATGTAAATTATAAACTATTTTCTTGTTGTTTATGCTTTCATCATTACGAACAGCAGTTGGAAAAGTATCAACTGACACTGAAACTCATACTGTGCTTATTGTTCAACATTATTCAACATTTTAAAGCTACACTAAGACAGAATGCATTTTTTTTTTACTGTATTTATGTGAAGATTCATACATGTGAATCTGCAACAATACCTCCATATTATCAATGATGAAGCAACTATTTAAAATAAAATTAAAATCAACATGAACTAAAAATTAACAATACATCTACAGCATTTATTAATCTTACTTAATGTTAATTTCAACATTTACTAATACATTATTAAAATCAAAAGTTGTATTTGTTAACATTAGTTAATGCACTGTGAGCTAACATGAACAAAGAACGACAGTATTTTTATTAACTAACATTAACAAAGATTAATAAATAATGTAACGTGCATTGCTCATTGTTCATGTTAGTTAATACATTAACTAATGTTAACAAATGAGACTTTATTGTAAATTGTTACTCATTTAAGTTATACTTATAATATATACTAAGTATAACATAAGTTTTAAATTATATTAGTTATAAAGTATAATTTATATTTATTATCAATACTTATATAATATCATTTTACAATTATTTGCTTTTTTTTTTAAAGTGCTACTTTTCTGATTGTCTTTTTAACAGTTTTTCTCATCTCTGGAGTGTTTTGGGCACGACAAAACAAATTTATAGCAAAACTGGTAACACTTTAGTATAGGGAACATGTATTCACTATTAATTATGACTTTTCCCTCAATAAACGCCTAATTTACTGCTTATTAATAGTTAGTAAGTTAGTTGTTAAGTTTATGTATTGGGTAGGATTAAGAATGTAGAATAAGGTCATGCAGAATAAGGCATTAATATGTGCTTAATAATTACTAAAAAACAGCCAATATTCTAGTAATATGCATGCTAATAAGCAACTAGTTAAAAGACCCTAAAATAAAATGTTACCGTAAAGCTATACTCTAGGCTACATACAAAATAAATCAAGTGAAAGTATGCATTCATTGTAAAGCTAGTAAATCAAATGTGTGCAAAATTGAAAAATGTTCTATATTAATACTCAAGGTGAATAAATTCTCCAATATTTGCTTCGTCATGCTTTCCGCTGGCCCAGCTCTGCAGCAGCAGTGTCTGTTGTGAAGCACAGTTGTATTTCCTTTCCTCTCTTTGTTTAGACTGACAGGTAGAAGAGTAGCCGCGTGTCCATTGTGTCAGTGTGTGTGAGAGCGAGTGTGTGTCTTTGAATGGTGTGAAAGCACCAGGCTGGCATGCCAATAGATCTTTTCAGCAAATATAACCCCGACAGCATGCAGGCTTCCTTTAGTTTCTTTTATTTCTTCGGGCTCTCTGTCTACTCGCGCTGTGTTCACCAGTAATCAGATTATCAATCAAATAAATTCACAGTCTTTTTAGGCTTCGGCTAAATCTTCTTGCTTCCTGTGATTGACTAAAAGACTCCTTTTAAGTGCGCCAAGTCATGACTAAATCGAAAATATGAACTCAATTTATTTACATTTTGACAGCTGTTTATTTAGCTCAGTGTTGTTAGTTAATTAAATAAATTCTCATGAAAATCTTAAAGGAAGTTCTCAGTTCATTGCTGAGAAAATTATGTTAATAAAATTTTATAAAAGCAGATTCTAATTTGCCAATATGCAACTTTTAAACCTCTAAAATGTACAAATAAATCATTTAGAAGCAAAAATCACAGTTCATTCCAAATTCTTAATTCAATTTGATCTTAATCTACA

Function

NR:

description
cytochrome P450, family 4, subfamily V, polypeptide 7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU114191 True 2171 lncRNA 0.32 2 10665429 10681706

Neighbor

gene id symbol gene type direction distance location
CI01000016_10637748_10650217 TCAIM coding downstream 15212 10637639 ~ 10650217 (-)
CI01000016_10600154_10633808 TRIM71 coding downstream 31621 10599202 ~ 10633808 (-)
CI01000016_10571262_10572444 NA coding downstream 91561 10570705 ~ 10573868 (-)
CI01000016_10443526_10488009 NA coding downstream 177243 10442845 ~ 10488186 (-)
CI01000016_10386099_10386648 NA coding downstream 277947 10385825 ~ 10387482 (-)
CI01000016_10740961_10745890 ABHD5A, ABHD5 coding upstream 58240 10739946 ~ 10745890 (-)
CI01000016_10799559_10842613 SNRK, SNRKA coding upstream 117479 10799185 ~ 10843409 (-)
CI01000016_10897488_10911334 NA coding upstream 214480 10896186 ~ 10911334 (-)
CI01000016_10931329_10940939 ENTPD3 coding upstream 249106 10930812 ~ 10941053 (-)
CI01000016_10970952_10971167 NA coding upstream 288801 10970507 ~ 10971167 (-)
G100351 NA non-coding downstream 114005 10529416 ~ 10551424 (-)
G100379 NA non-coding downstream 186577 10476982 ~ 10478852 (-)
G100378 NA non-coding downstream 189294 10475251 ~ 10476135 (-)
G100324 NA non-coding downstream 313299 10333883 ~ 10352130 (-)
G100302 NA non-coding downstream 377938 10287251 ~ 10287491 (-)
G100350 NA non-coding upstream 54842 10736548 ~ 10736879 (-)
G100346 NA non-coding upstream 55247 10736953 ~ 10737372 (-)
G100358 NA non-coding upstream 65143 10746849 ~ 10749597 (-)
G100347 NA non-coding upstream 71908 10753614 ~ 10763884 (-)
G100469 NA non-coding upstream 211171 10892877 ~ 10893117 (-)
G100190 NA other downstream 613040 10051168 ~ 10052389 (-)
G99178 NA other downstream 850474 9814361 ~ 9814955 (-)
CI01000016_09510177_09512196 ID4 other downstream 1153001 9509622 ~ 9512428 (-)
G98691 NA other downstream 1407818 9256102 ~ 9257611 (-)
G98679 NA other downstream 1425500 9234996 ~ 9239929 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_010441 NA non-coding NC_007127.7 CM002900.2 7834219 ~ 7881277 (-)