G103051


Basic Information

Item Value
gene id G103051
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 1047654 ~ 1054770 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU117232
CTCCACTGAACCCTGTTTTTAATGTCTCTTCTGCTCACCGAGGCTGCATTTATGATCAAAAATATCATAAAAGCAGTAATAATGTGAAATATTATTATAATTTAAAATAACCCTTTTCTATTTTAATACATTTTAAAATGCTATTCATTCCTATGATGCAAAAATTAATTTTCAGCATCATTACTCCAGTCTTCAGTGTCACATGATCCTTCAGAAATCATTCTAATATGCTGATTTGCTCAAGAAACATTTCTTATTATTATCAATATTTTAAACAGTTGTGCTGCTCAATATATTTGTGGAACCAGAAATAAATTTTTTAAGATTCTTTGAATAGAAAATTCATAAGAACAGCATTTATTTGAAATAGTAAACTCTTGTAACATTACAAATGTCTACTGTCACTTGACTTTTGATCAATTTAATGCATCATGTGAATAAAAGTATTAATTTCTTTCAAAAAATCTTACTGACCTCAAACTTTTGAACAGTAGTGTATACAGTAGTGTATATAGTAGTGTATACAGTATCTCATATATAAGTATACTTCATTGAGGTTTTACTGTGAAGAATTTTAAAACAGATTTGACACGGTTTGCATAGTGTATTTATTATAATAATGCGTTATGGATTTGCTTATTGAGCCTTATTGAATGCCATGAGGTTATACATTCTGTCAGTGTGGCCTCCATGACCCCACAGTCTTTCTTATACCCCAAATAGATGCGTCTAGAACTCCCTCACACTTTATCACTTGCTTTGCATGCTTCACACTGTCTACATGAGGAATCTACAATGATCTTTATTATGTGACGATCGGAAATAGAGGTTGATATGTGTCAGAATCTGAAGCTGGGCAAAAAGCACCTCTTTGTTCCCCAATGATAAGCTATTTTTGCACTGGCGGCCAGACTATCCCAAAGCATCTGGCCTCTTGCATTTGAAATATGGTTAATGATTAAAACAGACCTCCACTTTGTCTAAAAAGGGTTTAACGAAGCCGTAAACATCTCAATCCATCATGGTCACAGGAACAAACTGATTGATACTATATAGGGAACTAAAAGCTTTAGTTTCTGTGTAAAACACTTAACGATTTATTTCAGACATCCTATTCTGCTGGCGCATCTTGACTCATATTTGGAGGTAGTTCTCACTGAAGCATCAAGTTGGACTAATCCCCTGCATTTTAGAGAGTTTATTTTGTGCTTTTGATGCTGGGTTGCGTAATAGTTATAGTAATAGCTCTGAACCGACGGGGTAAAATCCCTGATGCCTAACGCATACGCTGTACAGACTCAATCTGGCCGTTCTGTGAGAAGATGAAAACAGTGTGTGTTGCAGCACGTTGGGGGTTTTGAAGGGATTTGAGAAGCAGGTCACCTCTTGATAACTAAGCTTGTGTTTCAGCATGATGCATGCTTCATTAAAGCCGTCTGGAGGCCAAGCCTATCATGATCTCTTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117232 True 1496 lncRNA 0.36 2 1047654 1054770

Neighbor

gene id symbol gene type direction distance location
CI01000018_00992108_01000450 ZFHX2 coding downstream 47204 991446 ~ 1000450 (-)
CI01000018_00985130_00987510 NA coding downstream 59965 984992 ~ 987689 (-)
CI01000018_00837737_00838788 NA coding downstream 208790 837550 ~ 838864 (-)
CI01000018_00777676_00783256 NA coding downstream 264125 776512 ~ 783529 (-)
CI01000018_00333019_00452055 NA coding downstream 595599 333019 ~ 452055 (-)
CI01000018_01286376_01296170 NA coding upstream 230818 1285588 ~ 1296170 (-)
CI01000018_01307800_01363530 RTTN coding upstream 252212 1306982 ~ 1363933 (-)
CI01000018_01583609_01585366 CBLN2A, CBLN2, CBLN2B coding upstream 528140 1582910 ~ 1586169 (-)
CI01000018_01707576_01707950 NA coding upstream 652290 1707060 ~ 1708380 (-)
CI01000018_02069280_02070789 MTRR coding upstream 1014510 2069280 ~ 2071231 (-)
G103049 NA non-coding downstream 29773 1017661 ~ 1017881 (-)
G103042 NA non-coding downstream 38013 1009403 ~ 1009641 (-)
G103038 NA non-coding downstream 81644 965282 ~ 966010 (-)
G103028 NA non-coding downstream 98013 949240 ~ 949641 (-)
G102995 NA non-coding downstream 177737 869195 ~ 869917 (-)
G103067 NA non-coding upstream 74961 1129731 ~ 1130692 (-)
G103066 NA non-coding upstream 122622 1177392 ~ 1177703 (-)
G103064 NA non-coding upstream 123015 1177785 ~ 1178421 (-)
G103081 NA non-coding upstream 125438 1180208 ~ 1180752 (-)
G103137 NA non-coding upstream 332855 1387625 ~ 1387829 (-)
G103842 NA other upstream 904727 1959497 ~ 1960058 (-)
CI01000018_02389202_02488018 CNTNAP2, CNTNAP2A other upstream 1331438 2389201 ~ 2488018 (-)
G104968 NA other upstream 2427334 3482104 ~ 3500514 (-)
G105104 NA other upstream 2952927 4007697 ~ 4017817 (-)
G105200 NA other upstream 3188697 4243467 ~ 4246010 (-)

Expression


Co-expression Network