G106840


Basic Information

Item Value
gene id G106840
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000019
NCBI id null
chromosome length 5832599
location 414609 ~ 415260 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU121490
TACAGTACACCAGAGGAAAGATTTTTGTACAGCGTACTAAAAGGTTTCAACCAGAAATGAAAAAGAAACAGTTCAGGCTTTAGAAAAAGGTAAAACAGACAGATAGCGGTGCAAATATTATCGTACCATTCCAGTGCAGTTAAGGCTACTGTATGGTTGCATTGAGATCGGTGATGTGTTGTAGTTACATGGAAAGATTCGAACAAAAAGAGTCTAACTTTGGTCAACAAACATTGGAAAGAGCTGACATCAATATTAATGAATAATTTAAAAGCACATGTGCTTCTTAAACGCACTGCTCCTATGGCAGTCTGTGATGCCCAAAGCCCAGCTTTAGGAATGTGCCACATGAACAAACACTTATTGACCTACAATATCCCCCATTATGGTCGGCAACAGCTAAACAGGGCACTTCAACACTGTAGATGAGGAAAATATACAGCAGTTACAACATGAAGCTCTCCACTGAATCACTGCCAAACAGGAATGGAAGCAGAGTTTCAGGAAAGAAGTGTCACATTGGTAGAGGAAATTCTTGCAGCCAAAACCTTCACAGTGACCTTCTGTTCTCATCAGAGTTGCTTTGACTGAGTCAATGAAGGCCGTCCTCTAAAGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU121490 True 617 lncRNA 0.41 2 414609 415260

Neighbor

gene id symbol gene type direction distance location
CI01000019_00409331_00409726 NA coding upstream 4207 408835 ~ 410402 (+)
CI01000019_00206258_00209786 ALG10 coding upstream 204261 206171 ~ 210348 (+)
CI01000019_00028486_00103954 PPM1H coding upstream 310655 28486 ~ 103954 (+)
CI01000019_00496576_00497214 NA coding downstream 81316 496576 ~ 497615 (+)
CI01000019_00606223_00619716 NA coding downstream 190768 606028 ~ 619716 (+)
CI01000019_00642751_00656054 SLCO1D1 coding downstream 227491 642751 ~ 656667 (+)
CI01000019_00666293_00680914 NA coding downstream 250992 666252 ~ 680914 (+)
CI01000019_00681252_00695505 NA coding downstream 265783 681043 ~ 695586 (+)
G106841 NA non-coding upstream 174398 237489 ~ 240211 (+)
G106858 NA non-coding upstream 177979 236403 ~ 236630 (+)
G106839 NA non-coding upstream 190021 224255 ~ 224588 (+)
G106734 NA non-coding upstream 212805 201285 ~ 201804 (+)
G106849 NA non-coding downstream 626 415886 ~ 416523 (+)
G106842 NA non-coding downstream 11826 427086 ~ 428118 (+)
G106843 NA non-coding downstream 21326 436586 ~ 439907 (+)
G106963 NA non-coding downstream 87905 503165 ~ 503674 (+)
G107009 NA non-coding downstream 148486 563746 ~ 646426 (+)
G107312 NA other downstream 1214172 1629432 ~ 1629985 (+)
G107310 NA other downstream 1285485 1700745 ~ 1706990 (+)
G108050 NA other downstream 1925739 2340999 ~ 2341333 (+)
G108563 NA other downstream 2753088 3168348 ~ 3169195 (+)
G108454 NA other downstream 2797191 3212451 ~ 3234285 (+)

Expression


Co-expression Network