CI01000019_00681252_00695505


Basic Information

Item Value
gene id CI01000019_00681252_00695505
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000019
NCBI id null
chromosome length 5832599
location 681043 ~ 695586 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000019_00681252_00695505.mRNA
CTATAAAAGGAAGAGCTTTACTGTGAGAAATATCTCATGACACAAGAGACTGGGACATACCACTCCCTAAAGTCAAACAAGAGAAATGGGAAGTATGGAAAAATTCCTTACAATATTTGGAAAATCTCCATATACCACGTACATACGTCCCACTCTCACTTTCCAGTTCAAAGTACAGTGAGCTGTGTCTATTCTCAGACTCATCGAACATGGCTATAGCTGCAGTGACCTATCTTCGAGTCTTTACTAAAGAGGTATTAAGTCATGTAGGATTCATTTTGGGCAAGGCTAAAATGGCCCCTCATCTACAGCCCACCATTCCACGCCTTGAATTGTGCGCAGCAGTATTAGCTGTAAAAATGGCAGAAATAATACTTGAGGACGTCGATTTCGAACCAGATGCAGTCAAGTTCTACTGCGACAAAACATACAGCAATGAATTCAGCACCTTTGTGGAACAGAAGAACATCCCAAAAAGCAGTGTACTTATGAAGCTCAACCTTCAAATTCACAATGATCTGCTCAGAGTAGGTGGAAGTCTGAAAAATGCTTCTCTGGATCAGCATGAGAGAAATCCGATCATTGTTCCCAAGAACAATCATGTCACAACCCTGTTGGTGAAACATTACCATCAAGAAGTGAAACACCAAGGTAGTCAATTCACAGAAGGAGCAATTAGGACTGCAGGCTTGTGTATTGTAAATGGCAAAAGGCTCATCAGCTCCATATTGTACCGCTCTGTAACTTTTCGAAAACTAAGGGGTAGATTTGCACAGCAGAAAATGGCGAATCTTCCACCAGAGCATCTTGACTTGTCTCCTCCTTTCACTTATGTGGGTTTGGACGTATTCGGCCCATGGACTGTTCTGACTCGACGCACTAGAGGAGGTGCAGCAAACAGAAAACATTGGTCAATCCTTTTTACGTGCATGAGCACTAGAGCAGTTCATTTGGAAGTGATAGAGTCCATGGATACATCCAGCTGTATCAATGCATTACGTCGCTTCTTTGCCATAAGGGGACCAGCAAAACAGCTTAGATCTGATTGTGGAACAAATTTCATCGGAGCTTGCAAAGAACTTGGTTTCAAAACAGATCACACTGTCCAGAAACTGGGTTTCCCCTTGGAGTTCCTACCTGCAACTTTTCAGATAAAGATCTTAATGGAAGCCAATGGAGAAAAGTACAGACCCTTGCAAATCAGTTCTGGACCCGCTGGAAGACTACTGTGCACTCCTGCATACTTCCTGTTGCTGTGTGGGATTGTTTTGAAGTTCAACTCTTTCATCGGACTGCTCACCTTCAAAGCCAAATACATGGAGCAACAGTTTGGCCAGTCTGCATCAAGAGCTAACTTCCTTATTGGTGTCCTGATCCTGCCTGTGGTTGCCGTGGGAATATTCTTGGGCGGTCTGTTAATGAAAAGATACAAGTTGAGCGTTGTGGCAGGGGCTCAGCTCTCCTTCATCACCTCCTTCTCGGCCTTCCTTCTACTCCTCCTCCAATTCGGCACAAAGTGTGACAATTTGCCTGTGGCAGGGCTCACTGTGTCCTACAATGGGACTCCTGATACATCTTATGATGAGCGCTCACTCATGTCTCAGTGTAATCAGGACTGTTCCTGCTCTACGTCTGAATGGGATCCTGTGTGCTCTGACAGTGGCATTACATATGTGTCGCCCTGTTTGGCAGGATGCACTGCCTCCACTGGACGAGGCAAAAACACGGTTTTCCACAACTGCAGCTGTGTCTTAACCCCCTCACCAGTAGAGGGCAGCAGATCTGTGTCTCTGGGCCAGTGTCCCCGTGGGCCAGCATGTACCCGGAGTTTCACCTCCTATATGGCTGTATCTGTCCTCAGCTCCTTCATCAACTCTCTGGGCACTACTCCTGGATACATGATCACTATACGAGTGATCTTCTTGAGCCTGACCACATGTTTAAGTGGATGTTCCTACTTCTTCATCATTGCTGTCATCGTGCTGCTGCGGAAGCAGTTTAGTAAAGAAGAGGTCAAAGCATTAAAGCAAACAGCCAGCAAGAAAAATGAAATTGAACTTCAGGCCCCACAGAAGCACCACCCTGATGGATCCAAAACTGATACTAGGGAAAAAACTGAAACAACCAATGCTGAAGGCTAGCGATGAGCACCACAATATCATTATGTAACTCTTTCAGGGAATTCAGGAGACATTGCTGAGATGGTAATGGGTGGAGAACTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000019_00681252_00695505.mRNA True 2222 mRNA 0.45 8 681043 695586

Neighbor

gene id symbol gene type direction distance location
CI01000019_00666293_00680914 NA coding upstream 129 666252 ~ 680914 (+)
CI01000019_00642751_00656054 SLCO1D1 coding upstream 24376 642751 ~ 656667 (+)
CI01000019_00606223_00619716 NA coding upstream 61327 606028 ~ 619716 (+)
CI01000019_00496576_00497214 NA coding upstream 183428 496576 ~ 497615 (+)
CI01000019_00409331_00409726 NA coding upstream 270641 408835 ~ 410402 (+)
CI01000019_00699257_00717659 SLCO1F4, SLCO1F3, SLCO1F2 coding downstream 3626 699212 ~ 717691 (+)
CI01000019_00739862_00741111 IAPP coding downstream 44276 739862 ~ 741200 (+)
CI01000019_00750525_00759434 RYROXD1, PYROXD1 coding downstream 54555 750141 ~ 759844 (+)
CI01000019_00785792_00786324 NA coding downstream 90206 785792 ~ 786398 (+)
CI01000019_00786469_00789270 NA coding downstream 90827 786413 ~ 789650 (+)
G107009 NA non-coding upstream 34617 563746 ~ 646426 (+)
G106963 NA non-coding upstream 177369 503165 ~ 503674 (+)
G106843 NA non-coding upstream 241136 436586 ~ 439907 (+)
G106842 NA non-coding upstream 252925 427086 ~ 428118 (+)
G106849 NA non-coding upstream 264520 415886 ~ 416523 (+)
G107049 NA non-coding downstream 25977 721563 ~ 721803 (+)
G107056 NA non-coding downstream 47816 743402 ~ 743611 (+)
G107061 NA non-coding downstream 52354 747940 ~ 748197 (+)
G107062 NA non-coding downstream 53481 749067 ~ 749367 (+)
G107000 NA non-coding downstream 67255 762841 ~ 763126 (+)
G107312 NA other downstream 933846 1629432 ~ 1629985 (+)
G107310 NA other downstream 1005159 1700745 ~ 1706990 (+)
G108050 NA other downstream 1645413 2340999 ~ 2341333 (+)
G108563 NA other downstream 2472762 3168348 ~ 3169195 (+)
G108454 NA other downstream 2516865 3212451 ~ 3234285 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_029742 slco1e1 coding NC_007115.7 CM002888.2 77349261 ~ 77380592 (-)