CI01000021_04529150_04530169 (NPBWR2)


Basic Information

Item Value
gene id CI01000021_04529150_04530169
gene name NPBWR2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 4528424 ~ 4530359 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000021_04529150_04530169.mRNA
AGCGTGAATTTGTTTGAACAGTCTGTTTTTCGGCAGGATGCCGATGTATTGTATCACTCTGAGATCTCATGTCGCGCAAAGAGACAGATGAAAGACATCGACCACCTTAGACTCGTGGAGAGATCTGCGAAAGCAAGAGCGCAGCTTTATAAAGTAAAGCACTTATCCCCGGAGGCTCAACTGTCACAGTATGGAGAACATCACAAGTCCCTTCATCCCAAACCCAACATGCAACAACAGCATGGACTTATACTATCACAACTCTCCCAACCGGAGCGATCTGAATTGCACGCCGCCGGCTGACTACTTATTTTACGCAGATCTGTACGTGGTTCTCCCGGTCATTTACTCCGTGATATGTGCCGTAGGTCTGACGGGCAACACGGCGGTCATATATGTGATCCTCAAAGCACCCAAAATGAAGACGGTGACCAATATGTTCATTCTGAACTTGGCGATCGCCGACGACCTCTTCACTTTAGTGCTGCCCATCAATATAGCGGAGCATCTGTTACACTACTGGCCGTTCGGCGAAGTGCTTTGCAAAATTATTTTAAGCATCGATCACTATAACATCTTCTCCAGCATCTACTTTCTGACAGTTATGAGTGTGGACCGGTACCTGGTGGTGCTGTCGACCGTGCGCTCCAAGCGCATGCCGTACCGCACATACCGGGCAGCGAAGATAGTGAGTCTGTGCGTGTGGCTGCTGGTGATCCTCATCGTCATGCCCTTTACCGTGTTCGCAGGAGTCTACATCAGCCCCGACGACTCCGACAGGAAAAGCTGCGTGCTGAGTTTCCCTAGTCCTGAAAGTTTATGGTTCAAAGCGAGCCGGATTTACACCCTCATACTGGGCTTTGCCATTCCAGTGTCTACAATTTGCATTCTTTACACCATGATGCTGTACAAACTAAGAAACATGCGTCTGAACACCAACGCCAAAGCGCTGGACAAAGCCAAGAAGAAGGTGACTATCATGGTGTTTATTGTACTGGCCGTGTGCCTGTTCTGCTGGACGCCCTTTCACCTCAGCACCATCGTAGCGCTGACCACAGACCTTCGGACCACACCGCTTCTCATCGGCATCTCGTACTTCATTACCAGCCTGAGCTACGCCAACTCCTGTCTGAACCCGTTCCTCTACGCCTTCCTGGACGACAGCTTCAGAAAAGCATTCAAGAAGATGTTAGAATGTAGACCTGCATGAATGTAACGCATTTTGAAGGGACGAGTAACAGGGTTGTGGACCATTCAGAATTTAATTCGATTCCTGGATTTGAATTAAGGTAGCAAACAGATGCAGTTTATGTATTTAGCAATTGGAATATACCTCATTAAAATATAAAATAGCCTATATTACCAAATTTCAAATAAATATTTTATATTTTAATTATATATATATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATATATATATATATATATCCTGTAGTTTGTGGCCAATTAAATTCAAAACTGGATTTTTAAATTCAAAATTGTGTCCAGCCCTGATTAAAATAGTTATGATCAAAACTGAATACTGACAGTGTCTCAAAACAAAACTGATCAGCCCATATAGGCATTTTATTTTTTAAACCATTATCGTTCCAATTCAGTATTGTAGTTTCTATCCAATTAAATTCAAAGTCACACTCATAAACTTAAAGGGAACCAATTTTAAAATTCTATTTTTTTTGCCCAAATACAGTTCCAGTGAATAAA

Function

symbol description
npbwr2 Predicted to enable G protein-coupled receptor activity and neuropeptide binding activity. Involved in G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be active in neuron projection. Predicted to be integral component of plasma membrane.

GO: NA

KEGG:

id description
K08377 NPBWR2; neuropeptides B/W receptor 2

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000021_04529150_04530169.mRNA True 1936 mRNA 0.38 1 4528424 4530359

Neighbor

gene id symbol gene type direction distance location
CI01000021_04248892_04258642 RGS19 coding downstream 269640 4248064 ~ 4258784 (-)
CI01000021_04191779_04194388 NA coding downstream 334025 4191606 ~ 4194399 (-)
CI01000021_04183864_04186516 SOX18 coding downstream 341868 4183179 ~ 4186556 (-)
CI01000021_04102462_04141661 NA coding downstream 386399 4100664 ~ 4142025 (-)
CI01000021_04061478_04074988 XKR7 coding downstream 453436 4061478 ~ 4074988 (-)
CI01000021_04554591_04555147 NA coding upstream 24128 4554487 ~ 4555870 (-)
CI01000021_04567226_04567519 NA coding upstream 36788 4567147 ~ 4567616 (-)
CI01000021_04803637_04803849 NA coding upstream 272804 4803163 ~ 4803849 (-)
CI01000021_04807791_04818427 KIF3B coding upstream 276526 4806885 ~ 4820526 (-)
CI01000021_04822864_04825902 POFUT1 coding upstream 291807 4822166 ~ 4825902 (-)
G118304 NA non-coding downstream 3913 4524264 ~ 4524511 (-)
G118299 NA non-coding downstream 17026 4511194 ~ 4511398 (-)
G118297 NA non-coding downstream 21808 4506294 ~ 4506616 (-)
G117844 NA non-coding downstream 235948 4291193 ~ 4292476 (-)
G117775 NA non-coding downstream 256630 4265949 ~ 4271794 (-)
G118347 NA non-coding upstream 37977 4568336 ~ 4568551 (-)
G118367 NA non-coding upstream 60172 4590531 ~ 4590766 (-)
G118376 NA non-coding upstream 68709 4599068 ~ 4599304 (-)
G118389 NA non-coding upstream 79071 4609430 ~ 4609658 (-)
G118417 NA non-coding upstream 139603 4669962 ~ 4670256 (-)
CI01000021_04035411_04049515 CCM2L other downstream 478832 4035189 ~ 4049592 (-)
CI01000021_03902018_03931315 ACSS2 other downstream 596706 3901897 ~ 3932508 (-)
G117893 NA other downstream 1483637 3044019 ~ 3044787 (-)
G117683 NA other downstream 1636089 2891860 ~ 2892359 (-)
G116997 NA other downstream 1815177 2712785 ~ 2713247 (-)
G118639 NA other upstream 219738 4750097 ~ 4767372 (-)
G118801 NA other upstream 623532 5153891 ~ 5154291 (-)
G119215 NA other upstream 994496 5524855 ~ 5530926 (-)
G119267 NA other upstream 1083083 5613442 ~ 5613989 (-)
G119233 NA other upstream 1250715 5781074 ~ 5782246 (-)

Expression


Co-expression Network