Gene
RNA
| Item | Value |
|---|---|
| gene id | G117683 |
| gene name | NA |
| gene type | misc |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000021 |
| NCBI id | null |
| chromosome length | 7014339 |
| location | 2891860 ~ 2892359 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU133731 | False | 476 | TUCP | 0.50 | 1 | 2891860 | 2892335 |
| TU133728 | False | 272 | lncRNA | 0.50 | 1 | 2892088 | 2892359 |
| TU133729 | True | 248 | lncRNA | 0.50 | 1 | 2892088 | 2892335 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000021_02791299_02829637 | CHL1A | coding | downstream | 62209 | 2790485 ~ 2829879 (-) |
| CI01000021_02620174_02687913 | CNTN3A.1 | coding | downstream | 204175 | 2619568 ~ 2687913 (-) |
| CI01000021_02522404_02530893 | NA | coding | downstream | 361195 | 2522053 ~ 2530893 (-) |
| CI01000021_02503590_02509554 | TTLL9 | coding | downstream | 382534 | 2502568 ~ 2509554 (-) |
| CI01000021_02492524_02493429 | PPP1R3DA | coding | downstream | 398659 | 2492137 ~ 2493429 (-) |
| CI01000021_03088285_03098959 | NA | coding | upstream | 195666 | 3088025 ~ 3098959 (-) |
| CI01000021_03184886_03225117 | TNS2, TNS2A | coding | upstream | 292207 | 3184566 ~ 3231042 (-) |
| CI01000021_03246184_03250332 | NA | coding | upstream | 353652 | 3246011 ~ 3250332 (-) |
| CI01000021_03267771_03288743 | EIF4BA, EIF4B | coding | upstream | 374943 | 3267302 ~ 3288743 (-) |
| CI01000021_03319954_03323293 | NA | coding | upstream | 426751 | 3319110 ~ 3323340 (-) |
| G117139 | NA | non-coding | downstream | 21815 | 2869945 ~ 2870273 (-) |
| G117136 | NA | non-coding | downstream | 24656 | 2867203 ~ 2867432 (-) |
| G117104 | NA | non-coding | downstream | 144276 | 2747078 ~ 2747812 (-) |
| G116959 | NA | non-coding | downstream | 276029 | 2608574 ~ 2616059 (-) |
| G116962 | NA | non-coding | downstream | 297905 | 2592751 ~ 2594183 (-) |
| G117881 | NA | non-coding | upstream | 120279 | 3012638 ~ 3013091 (-) |
| G117882 | NA | non-coding | upstream | 127710 | 3020069 ~ 3020284 (-) |
| G117884 | NA | non-coding | upstream | 133421 | 3025780 ~ 3026250 (-) |
| G117894 | NA | non-coding | upstream | 153839 | 3046198 ~ 3046429 (-) |
| G117896 | NA | non-coding | upstream | 159139 | 3051498 ~ 3051844 (-) |
| G116997 | NA | other | downstream | 178841 | 2712785 ~ 2713247 (-) |
| G116893 | NA | other | downstream | 557772 | 2331314 ~ 2334316 (-) |
| G116856 | NA | other | downstream | 681592 | 2209921 ~ 2210496 (-) |
| G116730 | NA | other | downstream | 1529284 | 1361878 ~ 1362804 (-) |
| G117893 | NA | other | upstream | 151660 | 3044019 ~ 3044787 (-) |
| CI01000021_03902018_03931315 | ACSS2 | other | upstream | 945063 | 3901897 ~ 3932508 (-) |
| CI01000021_04035411_04049515 | CCM2L | other | upstream | 1152925 | 4035189 ~ 4049592 (-) |
| G118639 | NA | other | upstream | 1857738 | 4750097 ~ 4767372 (-) |
| G118801 | NA | other | upstream | 2261532 | 5153891 ~ 5154291 (-) |
