CI01000024_03583865_03588688


Basic Information

Item Value
gene id CI01000024_03583865_03588688
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000024
NCBI id null
chromosome length 8644187
location 3582159 ~ 3588785 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000024_03583865_03588688.mRNA
AGTGTGATGAGAATCAAAAAACAAGTCAGAGTGTGTCATTCACTCCACTGTTTTAATCAAGAGGATTACATCCCATGTACGTGTGTGTACATACAGGATGTATTCAGTGTGGGATCATCATCTGGTAAATGTGTGCGAGTGGGTCAGCGGTAGAGAGAGAGAGAGGTGTTCTGTATCTTATGCAGTGGCTGACTCATTTGCTTGTGAGGGATTAAGCAGGATAGAGAGGGATTACGCTTCTTTTTTCCAAGAGGACTTTTCTGTGCTCTGTTATGGAATACTATCCACGTTATTCCTTCTGTTCATACCATCATTTTTGACTGTATATGAGGAGGGTAAGTGCATCGTTCTGTTATTCCCTGAACCCCAAAACACTCCTGGATTGACAATGAGACCAGACATGGAGACTGATCAACGGTCGGCTCCACTGGAGATGGGAGAGAAAGGCCTGACACAGATCTTAGCATATGTGATTGCTGAGGTGAGGGGTTCTGTCAATAAAGATATAAATGGAGCTGAGCTATTGTACAGTCTCCTCAACACCCCCTGGTTGCAGTCCCTACTAAAGGTGTATGAATGTCTACAGAGGCACATAAAGGGTCCAGCTAGGCCGTATCTCTCCTATTCGTCTGGACTCTCACTACAGGTACTGTCTGACCTGCTTGCAGTCCCAAACCCCTCAAATGAAGCTCGAGAACTGTATGCCCTCCTCAGTCAGCCCCACTTTCAGAAGTTTTTAAAGATGGACACTTCGAGTATTCAGTTAGTTGTGTGGAATGTTTTGTCAACCTTAAAAATAATAGAAACCGCATATATTTTTCAGGCTCTCCTCTCGGCTCATGACACAGTAAGTCTGAGGGACTATGAACCAGATCTGCCAGCACTGCCTAACGACCTGCCTGAAGACGAGGAAGCCATGAGGATTGTTTGCTTAGTCAAAAACAATCAGCCTCTGACCAGAACTGGAAGAAGGTTTCAAAGCCACTGGGAAACTTTAAGGCAAGCAACCCACTGTGGACTCTTCTCAGCTGGGGGACGGCTGGATGGAGGCTTAGATGCCAAGTTGGAAGGTCCCCGGGTGGGTGGTTCCATATCCACCGAGACTGTGTCCCCAAATGTTGTTGCTCCCACCGCTGCACAACTCTGCAACACTTTTGGCAGTTGCCGACAGAGCAATGCATTATGGAAACAGAGCCTCAGTTGCTCCACCCCTTGTGTTTGTAGCTCAGTTGTGATTGATAATTTGATTGAGGATGTAGACAGTGGGGAGGAGAGTGATGTTGGTAATTCTGTGCCACATACATTTTCCCAACCTTCCCCATGGATTTCCTCATCATCTTGCTGCTATCATCCTCCTCCAGAACCTTCGAGAACAACCCCTCATGCCCAAACTGCTCCCCCAAGCCCAATGCACTGTCATCGGGTAAGGGAGACCATCACATGCTCCCATACAAGGCTGGAAAAAGAGGAAGGTCTGGCTGAATTGCAGAGTACGTTGCAGCAGGCCACCAGCTGCATGGAGCGCAGTTCTGAAAACGTCCACCTGCTTGGTGAGAGGATGGCTGCTGCTACTGAACGCATATCTGAGAGTGTGCAGGAGAATTCTCAGGCTTTGACAATGCTAACACATGTAGTAGAGAAACTCCAGGAGCTAGTATCCACAAGCAACACATCTTCAGTATCTCCACATTGCGCTGAGACTACAAGAACCATGGTTAATCGGATGGGTAGTAGATCGCTCAGTGTTCCCGCCAGTCCAGCTATTGCCTCTTCCTCTCGCTTTTCTCATTGTCCTACCTGCTCCTCCTCCTCATCTTCTTCCTCATCTGCTATCACTCTGCTGGAGCAGCCAGTGCTATCAAAGGGGAGATCCTTTAATCCCAAAACAAAGCAATCGCTATCTTCTCAAAGGAGACAGGATGATGTACAGCACTGGATGACCAATGGGTCCTTGACGTCTAGCCCTGCTCAAAACCACAAAGTGAACAGCAGCACATTTGGATGTTTCTTTAACCAGAAGAAGAAGAAGAAAAAGGAATAAGGCTACCTTCACTTTTCCACGTTATGAACATCCTTTCCGATTCTGGCTGTCTCAAGCATGCAGGTCTTTCAAATATTTAATATGTGTGTTCATCATCTAATATGTTTTCTCTCACGACCAGGCCTTGACGTTGCCATTGTCACATTAGTGCTTGTCCAACCTTTTTGGAAGTAATGTATTGTTTTGTTTTGTTTGTTTTTTTTATTTGTCATTCTCATTGGTTTAACATCTTCATCATCTCTATGACTCAATCCCTTCTCATATAATCATCTCTTTACATTCAAAACTTCTTTTGACTGTTTCTTCTTTCCCTTCATGTAACATTGCAGTTCAGTTTGTCATTGAATAATGTTCCTGGCGTATGGAGTTAATATTGTGCCATAATTAAACAAACAAATCCAGCACTCTGCAAACAAACACGATCTGCTTTGCAAAAGAAAACTCGTCTTGCAAACAAACAGAAAGGGATGTGCAAATACAAAGGTCAGTTTGAGCGAAAACGCAGAGGAGTAACAAATATATGCATTGTGTTTTACAAATATAAATTACGATTGTAAGACACTTGCCTTTTTATGAGATCTCTCGGCTTGATTTTCTCAAAAATGTGTGCAGGCAGATTTTCTCACAAATGCAGTTGAGCAACTTCCTCTTCCAAAACAGCAGATGGCGCTTTGCTATAGGTCAATTTACGCTAGTCTCCCGAGAGAAGATCGTGTTTGTTTGCAAAATGCTGGATTTGTTTGTTTAATTATGGCACAATATTCACTCCATACTGGCATGCCACTTCCATCAGATGTAGCAATGATGTTTGATGAATGCATGTTTTGTGCTTCATACATATCAAATGAAGCCTTGTAGAAATTTGCAGATTAATATCTGCTTTCTTCTAACATATAGGGAGCAACAATCAGGAGAGATGACGTGACTGGGGAAATATACATTGCTCGGGTTATACATGGAGGACTGGCTGACCGCAGTGGTGAGGGTTCCCTGACTGTACTGTTTTTTTTCTGAACCTCTCTTCTCTATTTGTGTCTCTGATATGCCATACTCACATATCGTATGTTCTCGATGTTTATATTACATGTCTCACAGAGTCTCCATTTTTGTCTATGTGCTTCCTGTTGAAGGTCTTTTGCATGCTGGAGATAGGCTGGTGGAGGTAAACGGTCATCCAGTGTTTGGACTGGAACCAGAACAGATCATACAAATTCTGGTTAGTACACACTCTCACTCTTATATGAGTATATATTATATGTTTTGTTCCCTCTTGCTGTTTAGCTAGTATAACTGATTCTGTCACAGCTCATAGCAGCTGGCCTTCCTGACACCCACCCCCTTAAACCTCACTCCCCTCCGGGTCACGGCACCAATGTGACCAGTTTTGCTCAGCCCATTTTGAGTGGTGCTCGAACCGGCAAGACACGTCCATTATATATATCCATAATTTCATAACACTCTGTATTGGTTGTTAAAGTGGAATGAATAACTCTCTTTGTCTCAAACCAGTGATCTACTTTACCAAACAACAAAGCTACTCTCATTTAATTTAAAAGGAATTAAAAGAAAACTATGATAAATCAATATTCATGAAGTTTTGTGTCTTTATTTTCTGCCATAGGCTCACTCCCATGGAACCATAATGTTTAAGGTGGTTCCCATCACTGACAGGCCAGTCAACAACCAAACCATGGTGAGCAAATAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000024_03583865_03588688.mRNA True 3747 mRNA 0.43 9 3582159 3588785

Neighbor

gene id symbol gene type direction distance location
CI01000024_03563702_03570505 TMEM237, TMEM237B coding downstream 11654 3563606 ~ 3570505 (-)
CI01000024_03550821_03556930 CYP20A1 coding downstream 25229 3550560 ~ 3556930 (-)
CI01000024_03526772_03550303 ABI2, ABI2B coding downstream 31856 3525204 ~ 3550303 (-)
CI01000024_03499415_03506746 SUCLA2, SUCLA2.S coding downstream 75413 3498507 ~ 3506746 (-)
CI01000024_03473803_03480757 HTR2AB coding downstream 101402 3473590 ~ 3480757 (-)
CI01000024_03593801_03622283 ALS2, ALS2B coding upstream 4684 3593469 ~ 3622283 (-)
CI01000024_03682769_03686417 SUMO1, SUMO1.L, SUMO-1 coding upstream 93063 3681848 ~ 3686417 (-)
CI01000024_03792493_03872952 KALRNB, KALRN coding upstream 203678 3792463 ~ 3872952 (-)
CI01000024_03919201_03934276 TBX19 coding upstream 330402 3919187 ~ 3934505 (-)
CI01000024_03938368_03941795 NA coding upstream 349530 3938315 ~ 3941924 (-)
G123560 NA non-coding downstream 59582 3438967 ~ 3522577 (-)
G123593 NA non-coding downstream 145360 3436051 ~ 3436799 (-)
G123584 NA non-coding downstream 159144 3422686 ~ 3423015 (-)
G123583 NA non-coding downstream 174867 3406066 ~ 3407292 (-)
G123557 NA non-coding downstream 203855 3378011 ~ 3378304 (-)
G123639 NA non-coding upstream 84354 3673139 ~ 3673343 (-)
G123641 NA non-coding upstream 91910 3680695 ~ 3680962 (-)
G123648 NA non-coding upstream 139982 3728767 ~ 3729062 (-)
G123577 NA non-coding upstream 164234 3753019 ~ 3754215 (-)
G123668 NA non-coding upstream 174659 3763444 ~ 3764097 (-)
G123233 NA other downstream 1027123 2547460 ~ 2555036 (-)
CI01000024_00825386_00837898 NA other downstream 2755308 824968 ~ 838550 (-)
G125457 NA other upstream 3768452 7357237 ~ 7358104 (-)
G125798 NA other upstream 4386882 7975667 ~ 7976047 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location