CI01000026_10234932_10250720 (HEATR3)


Basic Information

Item Value
gene id CI01000026_10234932_10250720
gene name HEATR3
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 10234932 ~ 10250720 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_10234932_10250720.mRNA
ATGGGAAAGACTAAGAACACCAAATTCAAACGACCACCGTTTTCCCCTGATGGTCTTGCAGCGACTCCTGTTAAACAGGCTGTTGAAGAATCAGAAGATGAAGACTGTCCGGCAGCGGAGCTACTCGATAAATTACAGAGTCCATCAGCAGATGTGCGCGAATACGCCTGTGCCAGTATCTCTCGTGTTGTACAGCAGAGTCAGACGATCCCAGGTTTCCTCCAGAGAGATGCAGTCAGGAAAATCGGACCTTTACTGCTGGATCGCAGCCTGCCGGTCAGAGAGACTGCTGCTGGAGCACTCAGGAATCTTAGTGCCTGTGGAGGCCCTGAAGTGTGTGAGGACATGGTCAGACAGGATGTGCTGACATCTCTCTCTGCTCTCCTGAGGGAGTGCTGTGCTGGCTTTGACCTGACCTCTCCTGCTATGAAAGGACAGAAACACAAGGTGGAAGACGTTGCCAATGAGGCAGTAAATTTACTTTGGAATCTCTGTGAGAGCAGTAGCACAGCAGTGTCAGTGTTCAACAAGTCTGCACTTCTAGATGTTCTTCTACATTGTCTACAGAGGCACCCTCAGAATATGGAGCTGGCAATATCAGCAGCCCACTGCTTGCACACAGTAACAGAAGAGAACTCAGAACTGGTGCGCAGTGTGAATGCAGGGGTATTTGGCATCTTGGACAACATTCTGTCTTCCACACACACCAGTATGGAATACACTCTCCTGCGCACACTGGCTGCAGGCTCTTTATGGAATCTAAAAAGCAGTCTGTCTTCAGCTCAGCAGTCTCAGACACTGACCGCACTGGCCGCCACTCTCTCACAAAGCCTCATTTTGGACGCTGGAGCGCTCATCCCAGAGCTGTGGCATGCTGAATCTGCCCGTCTGTCTAAAGAGACAACCTCTGCCACAGAGTCAGATCATACAGACGAACGGCCTGCAGAAATGGAGGAGGATGTGAGAGAAGAGAAGATGAATGGAAGAAAGCCCAATGGACAAATGTCAAAAACAAAAAGTGACATTTCAGATCTGTTGCCTAGAGACAGACTGGAGTTGCGAGAGGCCAAAGCACTGCTCTCAGCACAGCAGACATCCCTGGAAATCATCGTCAACATGTGCTGCTCCGATGAGCCCTCAGATGATGAGTGGGAGGAGATGTCCAGCAGTGATGAGAGCGAGATGTGTGCTGATGGGATGTCAGACACTAATTCCAGCCTGTTCTCTCCTCTTTGTCTGTCTGCTGAACTTCACACGATCCTGCTCAACCACAGCATACCTCAACAGGTCTTAAAGAAGGCAGAGTTCCCCAGTGCCGCGGCCCTTGAGCTTTCTTTTGTTTCTTCTAGGATGCACCGGGTGCAGTGTCGGGCACTGACGTGTCTCCATAATATCCTTTCCTCTATGGATACAGAGTCTCTCGGTGGTGCTTCAGGGCTTCAGGCCGTAGCTCTGCACCTTTCCTCATTGGTCTTTAGCTCAGCAGACGTATTAAAGGATGAGGAGTTCCTGGAGGCTGTGACCAGTGCTCTTCGCTCTCTTCTACAGATCATGGCTACCAAAAACATCCCTCAGTGTATGTCTCCACACCAGCTAATGAGTTTTTGTGAGGCTGCCACCAGCTGTGAGCTGGTCAGTGTGAGAGTTAACGCTCTGGCCATTCTCGGTATCACAGGAAGTTCTCTTGCCAAAGAGAAAAACACAGAAGACACTCTACAGCTGATTGGAAATGCATTACTGAATGTCGCAACGAAGGACACAAACCTGGTGGTGTGTGGTGAAGCGCTGGATGCCCTTTTCGATGTGTTTGCTGATGGCGACGAAGCAGAGAAAGCTGGAAAAAATATTAACCTGCTTTCGTCCCTCAAAGCCCTTCAGCCGGGGTTTAGGGCCAAGCTGCGAAAAGAAGGCAAAGGAAAATACAGCCCTGATCAGCTGTGTGTTCTGGACAACATAAGGATCAACCTTAAGAGATTCATCGGCTACTTGGAGAACCTGCAGAAAAAA

Function

symbol description
heatr3 Predicted to enable unfolded protein binding activity. Predicted to be involved in protein import into nucleus and ribosomal large subunit biogenesis. Orthologous to human HEATR3 (HEAT repeat containing 3).

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_10234932_10250720.mRNA True 2007 mRNA 0.50 15 10234932 10250720

Neighbor

gene id symbol gene type direction distance location
CI01000026_10205804_10233324 PAPD5 coding downstream 495 10205433 ~ 10234437 (-)
CI01000026_10151857_10176733 ADCY7 coding downstream 58199 10150667 ~ 10176733 (-)
CI01000026_10133129_10135047 NA coding downstream 99287 10132915 ~ 10135645 (-)
CI01000026_10035392_10061141 NKD1 coding downstream 172462 10035069 ~ 10062470 (-)
CI01000026_10014914_10019772 NOD2 coding downstream 214733 10013575 ~ 10020199 (-)
CI01000026_10347872_10351783 CEBPA coding upstream 97026 10347746 ~ 10351783 (-)
CI01000026_10421310_10440151 ABCC12 coding upstream 169439 10420159 ~ 10440927 (-)
CI01000026_10487830_10511296 SLC7A10A, SLC7A10 coding upstream 235095 10485815 ~ 10512739 (-)
CI01000026_10599580_10600367 NA coding upstream 348483 10599203 ~ 10600367 (-)
CI01000026_10658906_10667378 CELF1 coding upstream 407854 10658574 ~ 10667753 (-)
G133154 NA non-coding downstream 166137 10068396 ~ 10068795 (-)
G133144 NA non-coding downstream 204267 10030121 ~ 10030665 (-)
G133143 NA non-coding downstream 206172 10028552 ~ 10028760 (-)
G133070 NA non-coding downstream 260492 9973684 ~ 9974440 (-)
G133128 NA non-coding downstream 289580 9945007 ~ 9945352 (-)
G133669 NA non-coding upstream 469 10251189 ~ 10251428 (-)
G133681 NA non-coding upstream 9425 10260145 ~ 10260357 (-)
G133683 NA non-coding upstream 10610 10261330 ~ 10261585 (-)
G133643 NA non-coding upstream 104101 10354821 ~ 10355463 (-)
G133646 NA non-coding upstream 104932 10355652 ~ 10357541 (-)
G132721 NA other downstream 684288 9550030 ~ 9550644 (-)
G132575 NA other downstream 847216 9387151 ~ 9387716 (-)
G131742 NA other downstream 1927225 8306776 ~ 8307707 (-)
G130256 NA other downstream 3917778 6275511 ~ 6317154 (-)
G129750 NA other downstream 5415650 4785885 ~ 4820249 (-)
CI01000026_10788054_10788652 CD59 other upstream 536619 10787339 ~ 10789709 (-)
G133790 NA other upstream 583295 10834015 ~ 10859589 (-)
G133802 NA other upstream 1051195 11301915 ~ 11307181 (-)
G136110 NA other upstream 4304197 14554917 ~ 14555436 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location