XLOC_008400 (BX649487.2)


Basic Information

Item Value
gene id XLOC_008400
gene name BX649487.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 16829762 ~ 16829876 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00016813
GCCGACAGCTAGCTCTTTGCAATTCtgacatggtcgcccactgaatatgagcagggctgtgcccggtcgatacctggatgggagaccacatgggaaagctaggctgctgccggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000115267

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00016813 True 115 rRNA 0.57 1 16829762 16829876

Neighbor

gene id symbol gene type direction distance location
XLOC_008399 galnt17 coding upstream 283290 16521785 ~ 16546472 (+)
XLOC_008398 CR847990.1 coding upstream 310679 16518967 ~ 16519083 (+)
XLOC_008397 flot2b coding upstream 421779 16387088 ~ 16407983 (+)
XLOC_008396 p2rx8 coding upstream 458659 16343073 ~ 16371103 (+)
XLOC_008395 mrm3a coding upstream 637554 16185118 ~ 16192208 (+)
XLOC_008401 gdpd1 coding downstream 56320 16886196 ~ 16894875 (+)
XLOC_008402 ypel2b coding downstream 67678 16897554 ~ 16914645 (+)
XLOC_008403 BX571762.2 coding downstream 84855 16914731 ~ 16920987 (+)
XLOC_008404 plin2 coding downstream 200597 17030473 ~ 17048822 (+)
XLOC_008405 clptm1 coding downstream 244309 17074185 ~ 17095655 (+)
XLOC_008463 BX663520.1 misc downstream 4422315 21252191 ~ 21252282 (+)
XLOC_008394 BX511308.1 non-coding upstream 784258 16035869 ~ 16045504 (+)
XLOC_008393 NA non-coding upstream 810973 15987054 ~ 16018789 (+)
XLOC_008390 NA non-coding upstream 1047210 15778988 ~ 15782552 (+)
XLOC_008388 NA non-coding upstream 1164076 15629506 ~ 15665686 (+)
XLOC_008411 dre-mir-21-2 non-coding downstream 543913 17373789 ~ 17373915 (+)
XLOC_008412 CR848791.3 non-coding downstream 546491 17376367 ~ 17378063 (+)
XLOC_008419 NA non-coding downstream 1056322 17886198 ~ 17936128 (+)
XLOC_008420 CR385077.2 non-coding downstream 1256826 18086702 ~ 18086816 (+)

Expression


Co-expression Network