XLOC_008420 (CR385077.2)


Basic Information

Item Value
gene id XLOC_008420
gene name CR385077.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 18086702 ~ 18086816 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00016857
gctggcagctagctctctgcaactcttacatggttgctcactgaagcaaagcagggctgcgcctgttcagtacctggatgggagaccacatgggaaagctaggttgctccTGAAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000114337

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00016857 True 115 rRNA 0.54 1 18086702 18086816

Neighbor

gene id symbol gene type direction distance location
XLOC_008419 NA coding upstream 150574 17886198 ~ 17936128 (+)
XLOC_008418 zgc:113279 coding upstream 229824 17848590 ~ 17856878 (+)
XLOC_008417 si:ch211-213d14.2 coding upstream 328708 17752915 ~ 17757994 (+)
XLOC_008416 si:ch211-213d14.1 coding upstream 338383 17722054 ~ 17748319 (+)
XLOC_008415 adamts15b coding upstream 433895 17621375 ~ 17652807 (+)
XLOC_008421 dixdc1a coding downstream 43293 18130109 ~ 18155991 (+)
XLOC_008422 NA coding downstream 298774 18385590 ~ 18401208 (+)
XLOC_008423 NA coding downstream 701600 18788416 ~ 18792858 (+)
XLOC_008424 cadm1b coding downstream 777056 18863872 ~ 18988585 (+)
XLOC_008425 NA coding downstream 1069074 19155890 ~ 19157908 (+)
XLOC_008463 BX663520.1 misc downstream 3165375 21252191 ~ 21252282 (+)
XLOC_008412 CR848791.3 non-coding upstream 708639 17376367 ~ 17378063 (+)
XLOC_008411 dre-mir-21-2 non-coding upstream 712787 17373789 ~ 17373915 (+)
XLOC_008403 BX571762.2 non-coding upstream 1165715 16914731 ~ 16920987 (+)
XLOC_008400 BX649487.2 non-coding upstream 1256826 16829762 ~ 16829876 (+)
XLOC_008426 NA non-coding downstream 1096032 19182848 ~ 19187834 (+)
XLOC_008427 BX324206.2 non-coding downstream 1198026 19284842 ~ 19286143 (+)

Expression


Co-expression Network