XLOC_008427 (BX324206.2)


Basic Information

Item Value
gene id XLOC_008427
gene name BX324206.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 19284842 ~ 19286143 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00016863
GACTTTTTCAAGGCGTTCAGATTTGCGTGCACTATTCCATGTCGTATCCGTATAAACTCGTGAAAGAGAAAGCGAGAAATCTCCTACTGCTTCTGTCCACATTCTGAAGTGTTCATCAGATGGGTACATCTATCACAGGAGGCCACGAAAAACCATACGGAAAGATGATGATGCTACGTAACATTGTGGAAAACTGGATGGATTTAGACTTCTTACATGCAAGACTTGCAAGGCAAGAAAACAGAGAAAACCTGAATTCAAAACATGAAACTGGTGTGTgcagtgatgatgatgaagaacagcagtgtgctgatgaagtaaatgtTGAAGATGCTGTAGTGCCATGGACAAGACCCTGCATCCCTCCACCTGCCTGCGTGTCCTCATCTGAGCCAGATGCTGGTGTGGTCTCTTCATCTTCAGTATGAATCGGTTTCTCAGGCATGGACAGCCTCACCTCACAACTCTGTTCCAGTCTGACTGCAGCACTGAGGGATGTGATGGCAAAAACAAGTGAAGTCCAGAAGTCCAGCATGCAGCAGAACATGGGGTTTTGTCTGAAATACATGATTGTTTGAATAAGTTTGAATAAAGCTTAGTTTCGTA

Function

GO:

id name namespace
GO:0048731 system development biological_process
GO:0030154 cell differentiation biological_process
GO:0030182 neuron differentiation biological_process
GO:0007275 multicellular organism development biological_process
GO:0048856 anatomical structure development biological_process
GO:0048869 cellular developmental process biological_process
GO:0007399 nervous system development biological_process
GO:0032502 developmental process biological_process
GO:0022008 neurogenesis biological_process
GO:0048699 generation of neurons biological_process
GO:0005539 glycosaminoglycan binding molecular_function
GO:0050431 transforming growth factor beta binding molecular_function

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097206

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00016863 True 606 lncRNA 0.44 3 19284842 19286143

Neighbor

gene id symbol gene type direction distance location
XLOC_008426 NA coding upstream 97008 19182848 ~ 19187834 (+)
XLOC_008425 NA coding upstream 126934 19155890 ~ 19157908 (+)
XLOC_008424 cadm1b coding upstream 296257 18863872 ~ 18988585 (+)
XLOC_008423 NA coding upstream 491984 18788416 ~ 18792858 (+)
XLOC_008422 NA coding upstream 883634 18385590 ~ 18401208 (+)
XLOC_008428 BX324206.3 coding downstream 1489 19287632 ~ 19291377 (+)
XLOC_008429 jam3a coding downstream 7601 19293744 ~ 19320615 (+)
XLOC_008430 vps26b coding downstream 38554 19324697 ~ 19331078 (+)
XLOC_008431 acad8 coding downstream 49503 19335646 ~ 19348383 (+)
XLOC_008432 zgc:77784 coding downstream 169969 19456112 ~ 19602329 (+)
XLOC_008463 BX663520.1 misc downstream 1966048 21252191 ~ 21252282 (+)
XLOC_008420 CR385077.2 non-coding upstream 1198026 18086702 ~ 18086816 (+)
XLOC_008435 CR626889.1 non-coding downstream 402732 19688875 ~ 19721754 (+)
XLOC_008436 NA non-coding downstream 466738 19752881 ~ 19755818 (+)
XLOC_008449 NA non-coding downstream 1125149 20411292 ~ 20458876 (+)
XLOC_008454 CR848784.1 non-coding downstream 1610960 20897103 ~ 20901355 (+)

Expression


Co-expression Network