XLOC_008431 (acad8)


Basic Information

Item Value
gene id XLOC_008431
gene name acad8
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 19335646 ~ 19348383 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00016872
GGTTAGTCATCGCGTCACATAATCAACATGGCGGCTAGGGCACTCATAAGAGGTGTCCGATTGGGATCAAATAGTATCGGCAGACCACGCAGTTTAATATTTAACAGTTTGCATAGACGAGGAATAGCAGCTTGCATTGATCCCTCTATAGGACTTACAGATGAACAGAAAGAGTTTCAGAAGGTGGCATTTGACTTTGCTGCCAATGAAATGGCACCACATATGGCAGAATGGGACCAAAAGGAAATCTTCCCTGTGGAGGCCATGAGGAAAGCCGCCGAGCTGGGCTTTGGTGGGATTTACGTGAACCCTGATGTCGGGGGGTCTGGACTGTCTCGTCTGGACACTTCTATCATATTTGAGGCTTTATCCACAGGTTGTGTCAGCACGACTGCTTACGTCAGTATTCACAATATGTGTGCCTGGATGATTGACACATTCGGAAACAACGAGCAGAGGGAGAGGTTCTGTCCTGATCTCTGCTCTATGCAGAAGTTTGCCTCCTACTGTCTCACAGAACCTGGTAGTGGTAGTGATGCTGCTTCACTTCTAACCAGCGCAACGCTCAAAGGAGACCATTATATTCTGAACGGCTCCAAGGCGTTCATCAGTGGAGGCGGAGACACAGATGTTTATGTGGTGATGTGCAGGACAGGAGGGAAGGGGCCAAAGGGAATCTCCTGTCTGGTGGTTGAGAAAGGAACTCCTGGACTCAGCTTTGGCAAAAAAGAGAAGAAGGTAGGATGGAACTCTCAGCCAACCAGAGCCGTGATATTTGAGGACTGTGCTGTCCCTGTGACCAATCGGCTCGGGACGGAGGGGCAGGGCTTTAGCATCGCCATGAAAGGCCTAAATGGAGGCAGAATCAATATTGCATCTTGTTCTCTTGGAGCAGCTCATGCATCTGTGCTTCTAGCTCGAGATCACATGTGTGTGCGGAAACAGTTTGGAGAAACACTAGCGAACAGTCAGttccTGCAGTTTAAGCTGGCTGAAATGGCCACTAAACTGGTTGCGTCTCGTTTGCTTGTGCGTCAAGCGGCCTTGGCTCTGCAGGATGGGCGACCGGACGCCGTCTCGCTCTGCTCAATGGCCAAGCTCTTTGTGACAGATGAATGTTTTTCaatATGTAACCAGGCTTTACAGATTCATGGAGGTTATGGATACCTTAAGGACTATGCAGTGCAGCAGTACGTCAGAGACATTAGAGTACATCAGATATTGGAGGGAACAAATGAAGTGATGAGGATGATCATCGCGAGAAGTTTGCTCACTGAGTCCTGATGCTGAATGGAGTAAAAGTGTTTGTGCCGTCGTTGTCTAAAAGCACAGATATGAGGTCAGGTGCCTGTTATCTCCCTCATGATGTGACTGTAGAGATTACTGATCTTCCACACTCCTGTGTCTGTTGACTTTGTCCATGAGCCATCAACTATGTTTTTATGTATATCTTCAGAACGTTTATGCCTTAAACTTTTACATTAGTAAATCTAGGTTACTGTGTGGTGATATTCTAATAGCACAGTGAGGAATTTAGTTTGGGGTGGGGTATAAATTCTGGGATGTTACAAGACGATAAGTAAAGAGAAGCAATGGCTATGATGCTAAGTTACTGAAAGACTGGATTAAAGTTCAATAAATTAGTAAGTTCCATATTTCACTCGTTTGTGTACTTGCAGATTAATACAGCATTCAGCACTTACTTTTCACTACAGACAGCTCTCATTGTCAGATCATTTTCACAGCACTGAAGATCAAGCATGGCTTTGTAAATCTGATCCTCGTGTTATTCTTTAATTCTTAAATAGCTGTTGTGGCTTCTAACTGTCTTGTTCACcctgcaaaataataaaataaatatattttgatgaaA
>TCONS_00016873
ATCAACATGGCGGCTAGGGCACTCATAAGAGGTGTCCGATTGGGATCAAATAGTATCGGCAGACCACGCAGTTTAATATTTAACAGTTTGCATAGACGAGGAATAGCAGCTTGCATTGATCCCTCTATAGGACTTACAGATGAACAGAAAGAGTTTCAGAAGGTGGCATTTGACTTTGCTGCCAATGAAATGGCACCACATATGGCAGAATGGGACCAAAAGGAAATCTTCCCTGTGGAGGCCATGAGGAAAGCCGCCGAGCTGGGCTTTGGTGGGATTTACGTGAACCCTGATGTCGGGGGGTCTGGACTGTCTCGTCTGGACACTTCTATCATATTTGAGGCTTTATCCACAGGTTGTGTCAGCACGACTGCTTACGTCAGTATTCACAATATGTGTGCCTGGATGATTGACACATTCGGAAACAACGAGCAGAGGGAGAGGTTCTGTCCTGATCTCTGCTCTATGCAGAAGTTTGCCTCCTACTGTCTCACAGAACCTGGTAGTGGTAGTGATGCTGCTTCACTTCTAACCAGCGCAACGCTCAAAGGAGACCATTATATTCTGAACGGCTCCAAGGCGTTCATCAGTGGAGGCGGAGACACAGATGTTTATGTGGTGATGTGCAGGACAGGAGGGAAGGGGCCAAAGGGAATCTCCTGTCTGGTGGTTGAGAAAGGAACTCCTGGACTCAGCTTTGGCAAAAAAGAGAAGAAGGTAGTCAGCATCtacagtattaacattaaaatTCTAGCAATTGCATGCAAGTTTGAGAGCCAAAGGTCCTGTTCTTCCTGGATAATCACAAAGCCACGTTTCCTCCAAAA

Function

symbol description
acad8 Predicted to enable acyl-CoA dehydrogenase activity and flavin adenine dinucleotide binding activity. Predicted to act upstream of or within lipid metabolic process. Orthologous to human ACAD8 (acyl-CoA dehydrogenase family member 8).

GO:

id name namespace
GO:0006629 lipid metabolic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function
GO:0050660 flavin adenine dinucleotide binding molecular_function
GO:0003995 acyl-CoA dehydrogenase activity molecular_function
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors molecular_function

KEGG:

id description
ko00280 Valine, leucine and isoleucine degradation

ZFIN:

id description
ZDB-GENE-040426-828 Predicted to enable acyl-CoA dehydrogenase activity and flavin adenine dinucleotide binding activity. Predicted to act upstream of or within lipid metabolic process. Orthologous to human ACAD8 (acyl-CoA dehydrogenase family member 8).

Ensembl:

ensembl_id ENSDARG00000042658

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00016872 False 1873 mRNA 0.45 11 19335646 19348383
TCONS_00016873 True 827 processed_transcript 0.47 6 19335667 19340004

Neighbor

gene id symbol gene type direction distance location
XLOC_008430 vps26b coding upstream 4568 19324697 ~ 19331078 (+)
XLOC_008429 jam3a coding upstream 15031 19293744 ~ 19320615 (+)
XLOC_008428 BX324206.3 coding upstream 44269 19287632 ~ 19291377 (+)
XLOC_008427 BX324206.2 coding upstream 49503 19284842 ~ 19286143 (+)
XLOC_008426 NA coding upstream 147812 19182848 ~ 19187834 (+)
XLOC_008432 zgc:77784 coding downstream 107729 19456112 ~ 19602329 (+)
XLOC_008433 lim2.3 coding downstream 298519 19646902 ~ 19660757 (+)
XLOC_008434 si:dkey-4p15.5 coding downstream 333335 19681718 ~ 19688389 (+)
XLOC_008435 CR626889.1 coding downstream 340492 19688875 ~ 19721754 (+)
XLOC_008436 NA coding downstream 404498 19752881 ~ 19755818 (+)
XLOC_008463 BX663520.1 misc downstream 1903808 21252191 ~ 21252282 (+)
XLOC_008425 NA non-coding upstream 177738 19155890 ~ 19157908 (+)
XLOC_008423 NA non-coding upstream 542788 18788416 ~ 18792858 (+)
XLOC_008449 NA non-coding downstream 1062909 20411292 ~ 20458876 (+)
XLOC_008454 CR848784.1 non-coding downstream 1548720 20897103 ~ 20901355 (+)
XLOC_008455 NA non-coding downstream 1656350 21004733 ~ 21093616 (+)

Expression


Co-expression Network