XLOC_008415 (adamts15b)


Basic Information

Item Value
gene id XLOC_008415
gene name adamts15b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 17621375 ~ 17652807 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00016842
ATGTTTGATAAAGTGGTTCTATGGACAAGCCTGACTAGATATTGGAAAATCTCCATCATTGTTCTGCTCAAGGAATGTATTTCTGAGCAGACCTTTCTTGATGTTTGTGACCCTTGGCTGCCATTCTGTATAATCTTGCTATGGGTTTTGAGAACTGAGATCTCATTTGTAACTGAAGAGATTGTACCTGTTCAACTGACTGGAAGAAGCGGTGGACGACCCAGCTTCAGGCTCTCGGCTTTCGGCAGGAATTTCACACTCAATTTGACACCGGACAGCACCTTCATATCGCCAGCGCTGAAAGTTTACCATCTTTATCAATCCTTGAATCAAACCGAGGAGACTGGGACAGAGTTTTTAAAAGGCTGCTTTTACACCGGCTTTGTTGACTCCAGTGAAGACTCAGTCGTTTCTGTCAGCTTATGTCGTGGGATTTTAGGATCGTTTATTTCAGATGGTAAAGAATATCTAATCGAACCGAAATCTTTCGGTTTGGGGACTAAAGGAAAGTTAACCGAACAGCTGCATGTCATTAAAAGGAGACGTTTTGCAAAGTCCTCGCAGGTTTCTAAACAGCTGTCAGATATGAGAGCTGATCTTCAAAACTCAAGGATCCAGATGCCATCCAGGCGAAGGCGCTTTGTCTCAACTCCCAGGTTTATTGAGACGCTGGTTGTCGGTGACGCCTCCCTCACACACTTCTATGGGGACGAGATCAAGCACTACATGCTGACCTTGATGTCAGTGGCCGCCCAGGTTTACAAGCACCCCAGCATTAAGAACTCCATCAACATTGTGCTTGTGAAGATGCTGATTGTGGAGGATGAAGAGGTCGGGCCGTCCATCTCCAGCAATGGAGGCGTAGCTCTGCGTAGCTTCTGTGCCTGGCAGCAGCTCTTCAACCCGTCCAGCCACAGGCATCCGGAGCATTACGATACAGCCATACTGTTCACTAGAGAGGACATCTGTGGACATCAGAGTTGCGAGACGTTGGGTGTAGCTGATGTTGGAACCATGTGTGACACTAAAAGGAGCTGTTCTGTGATTGAAGACAACGGCCTTCAGGCTGCTTACACAACTGCACATGAGCTAGGTCATGTTTTGAGCATGCCTCATGATGACACTAAGAGCTGTGAGCAGCTTTTTGGACATCTAGGCGAGGATCATATCATGGCTCCTGTATTCACTCAGCTCAGTAAAACCTCACCCTGGTCACCCTGCAGTGCTTTGTACGTCACTGAGTTTTTCGACAATGGACATGGAGACTGTTTACTGGACGCCCCTGAGACCACAGTGGCTTTACCCACTGAGCTGCCAGGCCTAACTTACAGTCTGGACCGCCAGTGTCAGCAGATATTTGGAGAGGAGTTTTCACATTGTCCCAACACCTCATCCAGCGAGGTGTGTGAGCGGCTTTGGTGTCAACAGGAGGGCCAGTCTATGTGCACGACTCGAAACGGGAGTTTGCCCTGGGCGGATGGCACGAGCTGCGGCACCAACAGGACCTGCCTGAACAGTGTGTGCATGTCTTCTGAGGATGTCCTGAGGCCGCAGCCGGCTGTGGATGGAGGCTGGGGTGAGTGGGGATCATGGCAGCCGTGCTCCAGGTCATGCGGAGGTGGAGTGATGTTCTCCTACCGAGAGTGCAACCGACCGTCTCCGCAAAACGGAGGAAAATACTGCGTGGGCCAGAGAGTCAATTACCAGTCCTGCAACAAACAGGCCTGTGAGAATAACCGAGGAAAAAGTTTTCGGGAGGAGCAATGTGAAAAGTACAACAATCCCAATCACTTTGATATTCATGGCAATGTGAAGCAGTGGATTCCGAAATACGCTGGAGTGTCGTTACGGGATAGATGTAAACTCTTTTGCAGAGCACGGGGCAGCAGTGAATTCAGAGTGTTTGCACCGAAGgtgattGATGGAACCCCATGTGGTCCTGATACCACATCCTTCTGTGTTCAAGGCCAGTGTATCAAAGCTGGTTGTGACCTGGAGATCGATTCTAGTAAGAAGCTGGACAAATGTGCTGTGTGTGGAGGAAACGGCCAGAGCTGCAGGATAATATCTGGCTCCTTCAATAAAGTCGTCCATGGATATAGGGACATTGTGACGATTCCTAGTGGAGCCACTAACATTAACATCAAACAGCAGAGTCATGGAAGTATACCACACGATGGCCATTACCTGGCTGTACGAAGAGAAAATGGCAATTACATCTTGAATGGGAACTTCTCTGTATCCACTGTGGAGCAGCATATTCCAGTGCTGGGCGCTGTGCTGAAGTACAGTGGCTCTTCAACAACACTTGAGAGACTTCAGAGCTTCCGGCAACTTCAGGAACCCATCACAATACAACTGCTCTCCACCGCTGCCGAATCCATTCCACCGAAGGTCAAATACACCTTCTACATACCTAAAAGCATGGCGTTCAGTAAACCGAAAGACAAAAAGATTGCTGGCAAGTTGATTCATCCCTTTGGGGTGCCACAGTGGATCTCAAGCGAGTGGTCCGAATGCTCCAAAACATGTGGTTCTGGGTGGTCCAGGAGAAATGTGGAATGTAAAGACAATGCTGGCTTCTATTCAAACCACTGCAATAAAGATCTCAGACCGTCTGATATCAGGCCTTGCGCAGATCTGCCGTGTCCCATTTGGCAGATAGGACCTTGGTCTTCATGCTCTCAAACTTGTGGCCACGGGGAACGACAGCGCAAGATTCTCTGCATCGATTACACTGGGAAGACTGTGGAGCCAGAGAACTGTGACCCTGCCAAGATGCCTGAATCTGTATCTGAAAAGTGTTTCTACCAAGAGTGCTGA
>TCONS_00016843
CTACCTCAGCACGTTTAGTCTtgaaatacattaatattaacaactcaGTTGACAAACTGTTGCTATTTAGAAAGGAGTGTGCATCTCAGTTTTCATTGGGCAAACCCGATCCAGAGGTTTTTCATGAGCGCTGGTGGGAGGAGAGACTACAGCAGCGCTGGATATCAAAAATAAACCTCTCATTTCTCAGAAAGTATAAATACCAGCGCCTCAATCCAGAGACAGTCCTGTGGACTAAAGAGCTCAGGAACTTGGCTCCGATTTACCTATAATTCAATTTGCACTCATAGTAAGGATGCATTGAATTTATTCACTTTCAAAATAGTTTTAAGCTAGTGGCATGTGCTGGATAGTAgtcataaatgttaataatattaatattagagaAAGTGCTTGAGTAAGGCTTATGAAAGTTTGTCAGTCACATTAGATTAGTTGATCAATaagttacaaatattattattattttttaatttaggaaTAGCGGTGTTTTAATAAAATGTGGTCGTATTTAGTTATATTTGTTTGCCTCTTCGCTGAAACATCTGCTCGCTTGTTTGAGACTGAAGAGATTGTACCTGTTCAACTGACTGGAAGAAGCGGTGGACGAGTGGCAAAGAGGAGTGAAACGCAGCCCAGCTTCAGGCTCTCGGCTTTCGGCAGGAATTTCACACTCAATTTGACACCGGACAGCACCTTCATATCGCCAGCGCTGAAAGTTTACCGCGTCAAAGTCAAACCACAAGAAAAGTCAACCAGCAACCTGACAGATCTTTATCAATCCTTGAATCAAACCGAGGAGACTGGGACAGAGTTTTTAAAAGGCTGCTTTTACACCGGCTTTGTTGACTCCAGTGAAGACTCAGTCGTTTCTGTCAGCTTATGTCGTGGGATTTTAGGATCGTTTATTTCAGATGGTAAAGAATATCTAATCGAACCGAAATCTTTCGGTTTGGGGACTAAAGGAAAGTTAACCGAACAGCTGCATGTCATTAAAAGGAGACGTTTTGCAAAGTCCTCGCAGGTTTCTAAACAGCTGTCAGATATGAGAGCTGATCTTCAAAACTCAAGGATCCAGATGCCATCCAGGCGAAGGCGCTTTGTCTCAACTCCCAGGTTTATTGAGACGCTGGTTGTCGGTGACGCCTCCCTCACACACTTCTATGGGGACGAGATCAAGCACTACATGCTGACCTTGATGTCAGTGGCCGCCCAGGTTTACAAGCACCCCAGCATTAAGAACTCCATCAACATTGTGCTTGTGAAGATGCTGATTGTGGAGGATGAAGAGGTCGGGCCGTCCATCTCCAGCAATGGAGGCGTAGCTCTGCGTAGCTTCTGTGCCTGGCAGCAGCTCTTCAACCCGTCCAGCCACAGGCATCCGGAGCATTACGATACAGCCATACTGTTCACTAGAGAGGACATCTGTGGACATCAGAGTTGCGAGACGTTGGGTGTAGCTGATGTTGGAACCATGTGTGACACTAAAAGGAGCTGTTCTGTGATTGAAGACAACGGCCTTCAGGCTGCTTACACAACTGCACATGAGCTAGGTCATGTTTTGAGCATGCCTCATGATGACACTAAGAGCTGTGAGCAGCTTTTTGGACATCTAGGCGAGGATCATATCATGGCTCCTGTATTCACTCAGCTCAGTAAAACCTCACCCTGGTCACCCTGCAGTGCTTTGTACGTCACTGAGTTTTTCGACAATGGACATGGAGACTGTTTACTGGACGCCCCTGAGACCACAGTGGCTTTACCCACTGAGCTGCCAGGCCTAACTTACAGTCTGGACCGCCAGTGTCAGCAGATATTTGGAGAGGAGTTTTCACATTGTCCCAACACCTCATCCAGCGAGGTGTGTGAGCGGCTTTGGTGTCAACAGGAGGGCCAGTCTATGTGCACGACTCGAAACGGGAGTTTGCCCTGGGCGGATGGCACGAGCTGCGGCACCAACAGGACCTGCCTGAACAGTGTGTGCATGTCTTCTGAGGATGTCCTGAGGCCGCAGCCGGCTGTGGATGGAGGCTGGGGTGAGTGGGGATCATGGCAGCCGTGCTCCAGGTCATGCGGAGGTGGAGTGATGTTCTCCTACCGAGAGTGCAACCGACCGTCTCCGCAAAACGGAGGAAAATACTGCGTGGGCCAGAGAGTCAATTACCAGTCCTGCAACAAACAGGCCTGTGAGAATAACCGAGGAAAAAGTTTTCGGGAGGAGCAATGTGAAAAGTACAACAATCCCAATCACTTTGATATTCATGGCAATGTGAAGCAGTGGATTCCGAAATACGCTGGAGTGTCGTTACGGGATAGATGTAAACTCTTTTGCAGAGCACGGGGCAGCAGTGAATTCAGAGTGTTTGCACCGAAGgtgattGATGGAACCCCATGTGGTCCTGATACCACATCCTTCTGTGTTCAAGGCCAGTGTATCAAAGCTGGTTGTGACCTGGAGATCGATTCTAGTAAGAAGCTGGACAAATGTGCTGTGTGTGGAGGAAACGGCCAGAGCTGCAGGATAATATCTGGCTCCTTCAATAAAGTCGTCCATGGATATAGGGACATTGTGACGATTCCTAGTGGAGCCACTAACATTAACATCAAACAGCAGAGTCATGGAAGTATACCACACGATGGCCATTACCTGGCTGTACGAAGAGAAAATGGCAATTACATCTTGAATGGGAACTTCTCTGTATCCACTGTGGAGCAGCATATTCCAGTGCTGGGCGCTGTGCTGAAGTACAGTGGCTCTTCAACAACACTTGAGAGACTTCAGAGCTTCCGGCAACTTCAGGAACCCATCACAATACAACTGCTCTCCACCGCTGCCGAATCCATTCCACCGAAGGTCAAATACACCTTCTACATACCTAAAAGCATGGCGTTCAGTAAACCGAAAGACAAAAAGATTGCTGGCAAGTTGATTCATCCCTTTGGGGTGCCACAGTGGATCTCAAGCGAGTGGTCCGAATGCTCCAAAACATGTGGTTCTGGGTGGTCCAGGAGAAATGTGGAATGTAAAGACAATGCTGGCTTCTATTCAAACCACTGCAATAAAGATCTCAGACCGTCTGATATCAGGCCTTGCGCAGATCTGCCGTGTCCCATTTGGCAGATAGGACCTTGGTCTTCATGCTCTCAAACTTGTGGCCACGGGGAACGACAGCGCAAGATTCTCTGCATCGATTACACTGGGAAGACTGTGGAGCCAGAGAACTGTGACCCTGCCAAGATGCCTGAATCTGTATCTGAAAAGTGTTTCTACCAAGAGTGCTGAGGACTTCATCTGCAGTAAATGATTCGGTTGTTAAGACGTTCCTGTGAAACGATGGATTATCATTTGACCGTGCTTCAGGTTGGAGCAGGGAATTTTCAGCTTTAGACAGAAAACGGTTGAGCTGTGTGGAGTGAATGTTGCACGGATTGATTAAGTTGGGCTTTGGTTTTatcagatttatatatttataaccactatGGATGCAATAGATATCTACCTCATCAATGCTTTATTGCAGTTTCCCTAACTTCTAACTCCTGGATCATGTTCACACTTGGTTTTAAGATGATCACCCAAACACAAGTGGATGATGCTAAATGCAGATGCAAATGGGGACTGAAGCGTTTTGTGCTTGTTTGTGCAAGTTGAAAACACATCATATCAGATTGCTTTCACAGTTTATATGCTCATGTGGTGGAATGCATTTCAACATAAAACTACCTATTCCATCTACTGATGTGATTCCAAaacattatgggatgtgttttcAAGATGACCCAACCAGACTAAAGGTTACTGTCGCACGagaatttattttaagaaaccagtcttgaTTCTAACACAAAACCCAAAGTGTTGCAcaaagatttattattatcagaGTAGAAACCAACATTTTCTAATTTCCTGTACAAATCCCACCATGCAATTTTATGTTTCAAATACATCTAACATCCGAAGATAGATGTTTTggctaaaaacaagactaaaatgTAATGGATGTCTAAAAATAGTCCAAAAATAGACAAATACACAGATTTgacatgtgtagtcattcattcatgtctATTTAAAGACTTTTTGAAAACTTAGACATCTATCAGATTTTCACTGTTTTGCCAAGAACTCTTTGTTTGGATGTTTACTgtaggtgaagttttacaaactaatttctagAGGAGCATGATTATAGTGATATGATTGATct

Function

symbol description
adamts15b Predicted to enable metalloendopeptidase activity. Predicted to be involved in extracellular matrix organization. Predicted to act upstream of or within proteolysis. Predicted to be located in collagen-containing extracellular matrix and extracellular region. Predicted to be active in extracellular matrix.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000058252

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00016842 False 2823 mRNA 0.49 12 17621375 17651879
TCONS_00016843 True 4211 mRNA 0.45 9 17623115 17652807

Neighbor

gene id symbol gene type direction distance location
XLOC_008414 snx19b coding upstream 131649 17441734 ~ 17489726 (+)
XLOC_008413 rps6kb1b coding upstream 196785 17406920 ~ 17424590 (+)
XLOC_008412 CR848791.3 coding upstream 243312 17376367 ~ 17378063 (+)
XLOC_008411 dre-mir-21-2 coding upstream 247460 17373789 ~ 17373915 (+)
XLOC_008410 vmp1 coding upstream 248023 17343319 ~ 17373352 (+)
XLOC_008416 si:ch211-213d14.1 coding downstream 69247 17722054 ~ 17748319 (+)
XLOC_008417 si:ch211-213d14.2 coding downstream 100108 17752915 ~ 17757994 (+)
XLOC_008418 zgc:113279 coding downstream 195783 17848590 ~ 17856878 (+)
XLOC_008419 NA coding downstream 233391 17886198 ~ 17936128 (+)
XLOC_008420 CR385077.2 coding downstream 433895 18086702 ~ 18086816 (+)
XLOC_008463 BX663520.1 misc downstream 3599384 21252191 ~ 21252282 (+)
XLOC_008403 BX571762.2 non-coding upstream 700388 16914731 ~ 16920987 (+)
XLOC_008400 BX649487.2 non-coding upstream 791499 16829762 ~ 16829876 (+)
XLOC_008398 CR847990.1 non-coding upstream 1102292 16518967 ~ 16519083 (+)
XLOC_008422 NA non-coding downstream 732783 18385590 ~ 18401208 (+)
XLOC_008423 NA non-coding downstream 1135609 18788416 ~ 18792858 (+)
XLOC_008425 NA non-coding downstream 1503083 19155890 ~ 19157908 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000053_01847036_01856935 NA coding CI01000053 null 1845726 ~ 1857230 (-)