CI01000026_16112803_16120445


Basic Information

Item Value
gene id CI01000026_16112803_16120445
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 16112281 ~ 16121033 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_16112803_16120445.mRNA
ATATAAAAGAAAATTATAAATGCACAAGTAAAGATTGTACATACTGTACGTCTTCTAATTGTGTTTCTATTGTCTTGATCTAAATGTATATTCACGCCGTTCCGTTCATGCACACTCTTAAAAATAAGGGTTTCAAAAGTGGGTTTTCTCTCAGCAATAGAAGAACCATTTTTCAGTTAAGGTTCTTAAAAGAACTATTTTGTCTTAGTGTGACGATAATTTTAAAAATCTAAAGAACCTTTTTCCCCCCACTAAAACAACCCAGGAATGGAAAGGTTCAATGGATGTTAAAGGTTCTTCATGGAACCATAGATGCCAATAAAGGACATTGAGTGTATGTGTGTCACTTCGCACCCTGAGTGGCCCCATGAGAAATCTCTCTGTGATCACAGCACAACTGTTTCTCACCTGTCAGCCAACACAGGATCATTCTATCTCTTGCAATTATGTAGAGCTGTCCACAGAAGTCTGATGAAGTCTTAACCGTGCTGGCTATACACCACGCCTGTTACTGAGCCCGAGATGTCCATTAGCAGACGTTTCCGCAATGCTGCAACTATGCTGCAGAAATGTCAACAGCTGCCAGGCAAAATCAAGGCTGTGTTAAAGGACAAATTAGAGAAACCCTGGACAGTTACTGCTGGAAAAACAAAGTCTGATTTTCCAAAGTGTGAACGGCCTATTATTGGGCACACAGAAAGGCTATTTGGGAAAGGGCCTAAGGACACGAGGGTGAGTCAGGCGATGTTTCCAAGCACTTTCAGGCTGAAATACAGGCTGTTTTCATTTACATTACAATTCCTAGTATGTCTATTTAATGGTCGCGGGTGCGGGGCGGGGCGGGTTGTAAAAATAGATACAGTGGTGCGGGCCGTGCCAAATAACTTCATAAAAGCGGGACCCGCGGGAGGTCTGTTGCTATTTCTCTTTCTTTTCTCTGCCATTGCTGTGTTTCATCTTAAAGGGGGGCAGTGCTTAGGAAAGGGTCTACTCAATGTGTATAGGGTGAACATATGTGAATATCTTCAAGAGTTTAAAAATATGTTAGTTAAATTCAGCATAAATTTGGGAAACTCGCCATTGGCTGTTGTGTCACTCGCGTTGTGCACATATTGCGGGGCGGAGATATGTAATCAGCAGAGTCGCATAACTCGTCCTGCTGTCTTGTCTTGTCCCAGGAACAGTAAAGCAACTTTGAGTGACCATCCACCTGATCTCAGCCTGAATTATTCCATTCAACACACACACACAATCACACAGAGAACAAATTTGCACTCTCTTCACTCACATCTTGACAACATCCTAATAATCCTAAGACTACAGGAATGTGGCAATGAGGTTGAGCTCGCCCTCACACCACCAGCACATGGTACTGTTAACGAAACAAGCACTTCAGAAGCGCTGTCAGTCCTGTACTTGTTCCAGCGGCGCTGCAGTCCAGTTCAACAGTGAAAAACAAACATACAGGACTGAAACTAATGGCCATATGCCACACTGTAGAATTAATTCTACCTTGCCCCAGCCAGACGCAGCATTTGAGTGTTGGAGGTTGGAGGCAGAATCCCTTTGTTAAGCTTTGACCACACAAGTCACAGCATCGGCCCTCCTGCAGCAAGGGAAACGCCAACTTTGGAGTATTAAGAAAACCAATAGCCTTGTTGACATGAACATGGGAGCCTAACCCCCGCAGTCTCCTCATATGAGGCATTGATTTTTCTGTCTGGGTGCAGTGCTAAAGCCATTCATTCTCTATGGGCAGCAAGACTCGCTGGGCCCGGCCGAATTTTCCAACGCCCGCCCTTCTTACCTAAGGGCTAGAGGTTAAGATTTAAGCTCATATACACACACACACACACCTGCAAGACATGATTGGTGCTGGGCTTGTTTCACATGGACGAGAAGTGAGGGATGGCCTAACATCTCAGAGTCTTTGGAATAGCTTGACCTCACTGACCACAGGGGTCAAGGGTTCCTCATTCCCACCACAGAAGATTCTGTGGGTTGCAGTTTACCCAAAATTGGTTGCGCACACTTAGCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_16112803_16120445.mRNA True 2040 mRNA 0.45 8 16112281 16121033

Neighbor

gene id symbol gene type direction distance location
CI01000026_15963447_15967856 NA coding upstream 144392 15962522 ~ 15967889 (+)
CI01000026_15864670_15915098 NA coding upstream 197119 15864544 ~ 15915162 (+)
CI01000026_15796823_15797870 NA coding upstream 313654 15796823 ~ 15798627 (+)
CI01000026_15701090_15742400 ZNF536 coding upstream 369881 15701090 ~ 15742400 (+)
CI01000026_15462834_15471168 CCNE1 coding upstream 640974 15462834 ~ 15471307 (+)
CI01000026_16230831_16238059 NA coding downstream 109798 16230831 ~ 16238838 (+)
CI01000026_16258182_16292938 DPY19L3 coding downstream 137149 16258182 ~ 16292953 (+)
CI01000026_16457911_16493848 NA coding downstream 336550 16457583 ~ 16493955 (+)
CI01000026_16797241_16800469 S2544, SLC25A44A, SLC25A44, SLC25A44B coding downstream 675522 16796555 ~ 16801123 (+)
CI01000026_16806546_16810171 RABP1, CRABP1B, CRABP1, CRABP1.S, CRABP1A coding downstream 684464 16805497 ~ 16810375 (+)
G137262 NA non-coding upstream 27711 16084247 ~ 16084570 (+)
G137258 NA non-coding upstream 33451 16078596 ~ 16078830 (+)
G137207 NA non-coding upstream 73160 16038909 ~ 16039121 (+)
G136791 NA non-coding upstream 126928 15966445 ~ 15985353 (+)
G136816 NA non-coding upstream 185662 15926400 ~ 15926619 (+)
G137283 NA non-coding downstream 2896 16123929 ~ 16124242 (+)
G137301 NA non-coding downstream 44148 16165181 ~ 16165412 (+)
G137305 NA non-coding downstream 55111 16176144 ~ 16176463 (+)
G137313 NA non-coding downstream 68426 16189459 ~ 16189673 (+)
G137330 NA non-coding downstream 136647 16257680 ~ 16257910 (+)
G133542 NA other upstream 4635374 11476117 ~ 11477544 (+)
CI01000026_11241496_11246081 NA other upstream 4857208 11241496 ~ 11246204 (+)
CI01000026_11075931_11078249 MDK, MDKA other upstream 5033201 11075784 ~ 11079080 (+)
G133192 NA other upstream 5950320 10159819 ~ 10161961 (+)
G132667 NA other upstream 6543121 9568739 ~ 9569160 (+)

Expression


Co-expression Network