G127841


Basic Information

Item Value
gene id G127841
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 2913285 ~ 2913513 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU145244
ATCAGCTCCACAACTGCACAGTAGCTCACCAAACCAGCATTCATAATGTGTGTAACAGATACGACAGTTGGATTCCTACAATGTGTCAGGCACTGAGTAATGCTTTTATTACTCTTTTTACTGTATTTTTGGTAACACTTTACAATACGGGTGCACTAATATGCATTAATTCATGCTTAACTAATGCAAAGATAATCATGTTTTAATGTATGACTCATGAAGAACTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU145244 True 229 lncRNA 0.35 1 2913285 2913513

Neighbor

gene id symbol gene type direction distance location
CI01000026_02795613_02801257 TSPAN18, TSPAN18A, TSPAN18B coding upstream 111469 2795440 ~ 2801816 (+)
CI01000026_02722558_02725907 NA coding upstream 186980 2722558 ~ 2726305 (+)
CI01000026_02692703_02703519 TP53I11, TP53I11A coding upstream 209544 2692703 ~ 2703741 (+)
CI01000026_02659356_02660297 NA coding upstream 252632 2658605 ~ 2660829 (+)
CI01000026_02650632_02651292 NA coding upstream 261778 2650632 ~ 2651507 (+)
CI01000026_02928011_02935998 NA coding downstream 14498 2928011 ~ 2936306 (+)
CI01000026_02947832_02950047 RPS13, RPS13.L, RS13 coding downstream 34176 2947689 ~ 2950067 (+)
CI01000026_02976981_02977701 NA coding downstream 62928 2976441 ~ 2979013 (+)
CI01000026_03037832_03085312 NA coding downstream 124319 3037832 ~ 3085526 (+)
CI01000026_03163505_03268602 SOX6 coding downstream 249992 3163505 ~ 3268602 (+)
G127838 NA non-coding upstream 3143 2909924 ~ 2910142 (+)
G127826 NA non-coding upstream 29206 2883873 ~ 2884079 (+)
G127728 NA non-coding upstream 170825 2742089 ~ 2742460 (+)
G127725 NA non-coding upstream 176887 2735979 ~ 2736398 (+)
G127669 NA non-coding upstream 205154 2707525 ~ 2708131 (+)
G127855 NA non-coding downstream 40085 2953598 ~ 2953884 (+)
G127856 NA non-coding downstream 44821 2958334 ~ 2958590 (+)
G127815 NA non-coding downstream 360762 3274275 ~ 3274647 (+)
G127899 NA non-coding downstream 405961 3319474 ~ 3319736 (+)
G127519 NA other upstream 486279 2393683 ~ 2427006 (+)
G127531 NA other upstream 601150 2309322 ~ 2312135 (+)
G127500 NA other upstream 966846 1931183 ~ 1946439 (+)
CI01000026_00776867_00777588 NEDD8, BRAFLDRAFT_284180, NEDD8L, NEDD8.S other upstream 2135488 776757 ~ 777830 (+)
G127979 NA other downstream 839038 3752551 ~ 3762986 (+)
CI01000026_04327206_04331151 DOK4, DOK5 other downstream 1374360 4327206 ~ 4332085 (+)
G128137 NA other downstream 1517049 4430562 ~ 4431201 (+)
CI01000026_04556074_04556964 FOXB1B, FOXB1, FOXB1A other downstream 1642263 4555776 ~ 4557613 (+)
G128585 NA other downstream 3036300 5949813 ~ 5950122 (+)

Expression


Co-expression Network