Gene
RNA
| Item | Value |
|---|---|
| gene id | G130842 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000026 |
| NCBI id | null |
| chromosome length | 17172400 |
| location | 7725309 ~ 7726667 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU148778 | True | 628 | lncRNA | 0.31 | 2 | 7725309 | 7726667 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000026_07716356_07721570 | TIPIN | coding | upstream | 3704 | 7716356 ~ 7721605 (+) |
| CI01000026_07177994_07186042 | NA | coding | upstream | 537760 | 7177994 ~ 7187549 (+) |
| CI01000026_07160036_07169929 | GLCEB, GLCE | coding | upstream | 554978 | 7159592 ~ 7170331 (+) |
| CI01000026_07143654_07144440 | NA | coding | upstream | 580675 | 7143292 ~ 7144634 (+) |
| CI01000026_07134607_07138396 | NA | coding | upstream | 586688 | 7134607 ~ 7138621 (+) |
| CI01000026_07763144_07765276 | FIBIN, FIBINB | coding | downstream | 36041 | 7762708 ~ 7765336 (+) |
| CI01000026_07766716_07782894 | BBOX1 | coding | downstream | 40049 | 7766716 ~ 7782992 (+) |
| CI01000026_07872070_07873313 | CLN6, CLN6A | coding | downstream | 144908 | 7871575 ~ 7873357 (+) |
| CI01000026_07874837_07876094 | CALL4, CALML4A, CALML4 | coding | downstream | 148170 | 7874837 ~ 7876199 (+) |
| CI01000026_07900733_07907266 | RFX7 | coding | downstream | 174066 | 7900733 ~ 7908808 (+) |
| G130840 | NA | non-coding | upstream | 15155 | 7706999 ~ 7710154 (+) |
| G130834 | NA | non-coding | upstream | 20396 | 7704504 ~ 7704913 (+) |
| G130735 | NA | non-coding | upstream | 124439 | 7598433 ~ 7600870 (+) |
| G130738 | NA | non-coding | upstream | 127199 | 7597442 ~ 7598110 (+) |
| G130732 | NA | non-coding | upstream | 194337 | 7529674 ~ 7530972 (+) |
| G130864 | NA | non-coding | downstream | 23590 | 7750257 ~ 7750467 (+) |
| G130865 | NA | non-coding | downstream | 24900 | 7751567 ~ 7751773 (+) |
| G130843 | NA | non-coding | downstream | 58496 | 7785163 ~ 7786917 (+) |
| G130857 | NA | non-coding | downstream | 77261 | 7803928 ~ 7814866 (+) |
| G130910 | NA | non-coding | downstream | 150687 | 7877354 ~ 7877768 (+) |
| G130552 | NA | other | upstream | 628657 | 7095053 ~ 7096652 (+) |
| G128757 | NA | other | upstream | 1398524 | 6326196 ~ 6326785 (+) |
| G128601 | NA | other | upstream | 1733548 | 5983879 ~ 5991761 (+) |
| G128585 | NA | other | upstream | 1775187 | 5949813 ~ 5950122 (+) |
| CI01000026_04556074_04556964 | FOXB1B, FOXB1, FOXB1A | other | upstream | 3168992 | 4555776 ~ 4557613 (+) |
| G130967 | NA | other | downstream | 461707 | 8188374 ~ 8189073 (+) |
| CI01000026_08297901_08307596 | CTRB1 | other | downstream | 571906 | 8297857 ~ 8307629 (+) |
| G131077 | NA | other | downstream | 774741 | 8501408 ~ 8506787 (+) |
| G132667 | NA | other | downstream | 1842072 | 9568739 ~ 9569160 (+) |
| G133192 | NA | other | downstream | 2433152 | 10159819 ~ 10161961 (+) |
