G128601


Basic Information

Item Value
gene id G128601
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 5983879 ~ 5991761 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU146105
GAGGGCGCCAACTAACCAGAACAGAGAATGAGTCCAGCGCACTCAACTGCATATCCATAGGAGGAGAGGAGGGTCTATCTGGAAGTGTGGATTCTTCCACTGTGCTGCTGAAGGGGCCACTCATATCAACTCCATTAGATTGCACAGCGATTTCATAGCTAGTGAAGGGCTTAAGTGATCCCAGTAAAATCTCCTGAGAAGAGCTGGTATAGTATGAGACCAGCGATGCATTGCGTATTCCTGCGGGGCTGCAGCGTATAGTGTAGTTAATGATTCGCACATTGCTAAAGTGTGGTTTCTCCCAGCGGAGCCAGATAGAGGTGGAACTGTTCGCACGAGCTCTGATGCTGATGGGCGGCAATGGTGGGATAGAGTTTGGTGTCCGCACTCGTGTGAGCTTCTCTGTTCTGCCTTTCCAGACAGCAGGATAACCCTCAGTCTGTTTATTAAACGCCCAAACCTTCACCTCATACAGCCGATCAGGAGCAAGGCCTGTGACCTCATGGTGTTTAACTCTCTTCCTCAGTTTGATCTGTTGAATCTTCTCATTGATCACAGGCTTCTCCTCATTGGTCAGCTCCTCTCCATCCACCTCCCACCAGGAAAGCTTGTAGCCGGTGATCTGAGTGTGATTGGGCGGTGGCTGCCATGTGACATGGAGGGAATGCATTTTGGCTCTCACTTTGAGCTCAGTGGGAGCAAAGAGCACCTGAGTAAGGTTTGGTGTGTGGTGCGAGGCCCACTCAGAAGGCTGACTAAACCCAGCTCGTGTTCCCGCCGCAATCCGGAGCTGGTACGTTTGATTTGGTTTCAGATCCCTTAGAGTCACCTGTGTCTCATTCCCACCCACTTCCACAGAGTATATGTGATCCACTGCAGGGCACACACACACAAACACGTGCCAGAAAATAAGTATGCCAGTGGAAATCATTTCTGCAGCTGGCTGATAAAGAAGCATGAACAATGGATGTCTGAATTGACTTTGGTTCTGTCTTTCATTCTGTGTCACAGGCCATCAGACCGAATCTGTCTTTTGTTCCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU146105 True 1042 TUCP 0.50 6 5983879 5991761

Neighbor

gene id symbol gene type direction distance location
CI01000026_05828041_05831860 NA coding upstream 151870 5828041 ~ 5832009 (+)
CI01000026_05820062_05827011 NA coding upstream 156454 5820062 ~ 5827425 (+)
CI01000026_05809690_05817205 NA coding upstream 166406 5809690 ~ 5817473 (+)
CI01000026_05793556_05805041 CTDSPL2B coding upstream 178754 5793556 ~ 5805125 (+)
CI01000026_05771496_05786357 CASC4 coding upstream 197522 5771496 ~ 5786357 (+)
CI01000026_06109467_06140429 MYBPC3 coding downstream 117706 6109467 ~ 6141599 (+)
CI01000026_06174460_06187224 NA coding downstream 182128 6173889 ~ 6187476 (+)
CI01000026_06234663_06316874 METTL15 coding downstream 242902 6234663 ~ 6316874 (+)
CI01000026_06332081_06337355 NA coding downstream 339978 6331739 ~ 6337396 (+)
CI01000026_06385815_06391975 NA coding downstream 394054 6385815 ~ 6392502 (+)
G128591 NA non-coding upstream 15775 5967772 ~ 5968104 (+)
G128590 NA non-coding upstream 17339 5966215 ~ 5966540 (+)
G128588 NA non-coding upstream 25765 5957901 ~ 5958114 (+)
G128587 NA non-coding upstream 30149 5953432 ~ 5953730 (+)
G128586 NA non-coding upstream 30668 5952912 ~ 5953211 (+)
G128637 NA non-coding downstream 29005 6020766 ~ 6021071 (+)
G128646 NA non-coding downstream 42268 6034029 ~ 6039053 (+)
G128647 NA non-coding downstream 47579 6039340 ~ 6044316 (+)
G128619 NA non-coding downstream 56305 6048066 ~ 6085995 (+)
G128654 NA non-coding downstream 60109 6051870 ~ 6052325 (+)
G128585 NA other upstream 33757 5949813 ~ 5950122 (+)
CI01000026_04556074_04556964 FOXB1B, FOXB1, FOXB1A other upstream 1427562 4555776 ~ 4557613 (+)
G128137 NA other upstream 1552678 4430562 ~ 4431201 (+)
CI01000026_04327206_04331151 DOK4, DOK5 other upstream 1651794 4327206 ~ 4332085 (+)
G127979 NA other upstream 2220893 3752551 ~ 3762986 (+)
G128757 NA other downstream 334435 6326196 ~ 6326785 (+)
G130552 NA other downstream 1103292 7095053 ~ 7096652 (+)
G130967 NA other downstream 2196613 8188374 ~ 8189073 (+)
CI01000026_08297901_08307596 CTRB1 other downstream 2306812 8297857 ~ 8307629 (+)
G131077 NA other downstream 2509647 8501408 ~ 8506787 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_034843 igdcc4 coding NC_007118.7 CM002891.2 31625662 ~ 31759602 (-)