CI01000026_06234663_06316874 (METTL15)


Basic Information

Item Value
gene id CI01000026_06234663_06316874
gene name METTL15
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 6234663 ~ 6316874 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_06234663_06316874.mRNA
ACCCAAATGCCCATATATCGTTTCATGGAAACACCCTGCAAATGGACATTGGGACTATGGAAAGACGTGATTCCTGACCACAGCTCCAGAATGTTCAGACGATGTTGGAGGAAGTTGTGGCATCCAGGGAGGCCCTATACTGGCTCAGTGCCTTCAAGCCCTGATTCTGAGTTCAGAAATTCAGAGATGTCAACCCAAAGCGAGAGACCCTTACACACACCAGTCATGGTGAAGGAAGTGTTGCAGTTTCTGGACATCAAACCCGGGCAGGTTGTCCTGGACTTGACCTTTGGGGCCGGAGGTCACTCGAAGGCCATCCTGCAGTCAGTTCCTGGTGTAACGGTGGTGGCAGCAGATCGTGACCCCACAGCTTTCCAAATGGCTCAGCATTTAGCTGAAGAATACCCGGGCCAGGTGAAGCCAGTACTAGGGAGGTTCAGTGAGCTGAATAACCTGCTCCCAGTGTTGGGTTTGGGTCCAGGAAATGTGGATGCTGCTCTTCTGGATGCTGGTTGCTCCTCCATGCAGATGGATTCAGCAGAAAGGGGCTTCTCCCTCAGCAAGGATGGACCGCTAGACATGAGGATGGATGGAAACAGGTACCCCGACATGCCCTGCGCGGCTGACGTGGTCAACGCCTTAGATCAACAGGCGCTTGCGTCCGTGCTGGCCGTGTACGGGGAGGAGCGGCACACCAGGAAAATTGCGGCGGCCATCGCACAGGCACGCAGCGTCTACCCCATCGGCCGGACCCTGCAACTGGCCAGCATCGTAGCAGGAGCATTTCCAGCAAGTGCGCTGTACGCCCGGCGTGACCGCCTGCAGCGGCCTTCACACGTTGCCACCAAAACTTTCCAGGCCTTACGGATATTTGTAAACAACGAGCTCAACGAGTTGCACGCTGGCCTGAATGTGGCACAAACTCTGCTCCGTCCCAAGGGGCGACTCTGTGTTCTCACCTTCCATTCCTTGGAGGACCGGCTGACCAAGCGTTTCCTCCGTGGAGAGGACCTGGCTGCCCCACCGCGCCGCAGCATTCGCCAGCGAGCCAAAGCCCAG

Function

symbol description
mettl15 Predicted to enable methyltransferase activity. Predicted to act upstream of or within methylation. Orthologous to human METTL15 (methyltransferase like 15).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_06234663_06316874.mRNA True 1059 mRNA 0.57 5 6234663 6316874

Neighbor

gene id symbol gene type direction distance location
CI01000026_06174460_06187224 NA coding upstream 47187 6173889 ~ 6187476 (+)
CI01000026_06109467_06140429 MYBPC3 coding upstream 93064 6109467 ~ 6141599 (+)
CI01000026_05828041_05831860 NA coding upstream 402654 5828041 ~ 5832009 (+)
CI01000026_05820062_05827011 NA coding upstream 407238 5820062 ~ 5827425 (+)
CI01000026_05809690_05817205 NA coding upstream 417190 5809690 ~ 5817473 (+)
CI01000026_06332081_06337355 NA coding downstream 14865 6331739 ~ 6337396 (+)
CI01000026_06385815_06391975 NA coding downstream 68941 6385815 ~ 6392502 (+)
CI01000026_06422488_06426925 NA coding downstream 105539 6422413 ~ 6427191 (+)
CI01000026_06441927_06455849 NA coding downstream 124640 6441514 ~ 6455922 (+)
CI01000026_06503812_06560355 LGR4 coding downstream 186938 6503812 ~ 6560355 (+)
G128708 NA non-coding upstream 35137 6199224 ~ 6199526 (+)
G128622 NA non-coding upstream 85808 6147867 ~ 6148855 (+)
G128619 NA non-coding upstream 148668 6048066 ~ 6085995 (+)
G128620 NA non-coding upstream 164363 6069209 ~ 6070300 (+)
G128654 NA non-coding upstream 182338 6051870 ~ 6052325 (+)
G130330 NA non-coding downstream 88848 6405722 ~ 6406100 (+)
G130343 NA non-coding downstream 102981 6419855 ~ 6420099 (+)
G130357 NA non-coding downstream 119473 6436347 ~ 6436657 (+)
G130390 NA non-coding downstream 164873 6481747 ~ 6482158 (+)
G130394 NA non-coding downstream 168174 6485048 ~ 6485276 (+)
G128601 NA other upstream 242902 5983879 ~ 5991761 (+)
G128585 NA other upstream 284541 5949813 ~ 5950122 (+)
CI01000026_04556074_04556964 FOXB1B, FOXB1, FOXB1A other upstream 1678346 4555776 ~ 4557613 (+)
G128137 NA other upstream 1803462 4430562 ~ 4431201 (+)
CI01000026_04327206_04331151 DOK4, DOK5 other upstream 1902578 4327206 ~ 4332085 (+)
G128757 NA other downstream 9322 6326196 ~ 6326785 (+)
G130552 NA other downstream 778179 7095053 ~ 7096652 (+)
G130967 NA other downstream 1871500 8188374 ~ 8189073 (+)
CI01000026_08297901_08307596 CTRB1 other downstream 1981699 8297857 ~ 8307629 (+)
G131077 NA other downstream 2184534 8501408 ~ 8506787 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location