CI01000026_06422488_06426925


Basic Information

Item Value
gene id CI01000026_06422488_06426925
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 6422413 ~ 6427191 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_06422488_06426925.mRNA
ATATTTATCAAAATTTGTGTCTATCCTCATCAGATGTCCTTATCAAAAAAATGAGGAGGAAAGGAAAAACACAGAATGACAGTGAGAAGGATATCGCCAACACAGTCATTTCTCTGTAGCAGGAGCTTACGGTTAACTAAGCCAGGCGAAAAAAAACGAGATTGGCTCACTGAATATACCAAAGTGTTTTATGGCTGTCTGCGTGACCTCCAGTTTGTCACTAAACGTGCAAGTTTAATCTCTCAGATTTGGCAGGAGCTTAATGAGGCAGTGGGTGAGTCAGCCGCTCTGCTGCTGGAGATAGGATGGTGGTCTCACCTGATGTTTGGGCCGAGTGGATGGGGCCCACGATGCTTCGCCGTTCTGTTGCATACTCCCAGTACAGCTGCAACTCCGGCTCAAAGGACCACAAAATGTAGCGAAGGCTACCTTGAAGATAATAAGGACTGGTTTCGAGTAGGTATAGCAGTGTACCAGAGCGGGGAGCCAACCATTGACATGCACCTTAAACAATGCTTGAATGTGCAACAACTTCCAGGTACAATGAAGGAGGCAACAGCGAGTCAGTGGGGCCTTCTGAGGTCGAATCCAAGGGTGTTAACAAGTTCCAAGGAAATAGTAGTTAGTATGAGCACTTGGAATGGTGTCGAGCAAGCAAGCAATCATGGAGATGCGGGAGCACAAGCGGCACGTGTGGTCGAATATATGGAGTAATGTCCTTGTTTAAATGAGTTTGTGCCGAATCTTGATCAGATGGGAGTGTAACATGAATTGTGCTGATATTTGGTGTGGTTTGCTCTTATTAGACACACACAGAAGCACAATATACACTCAATATGAGGCTGGTAACCAATGTTATTCGTCTTTTCTAGCGCCTGTTTATGCGACAAACTGATATATGCAGTGGCTGATGCAATATACTGTTTGCTCCGTGCTGAATTGTTTTGCTTGTGAGCTTATGTGCGCGGCGTACTTTCATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_06422488_06426925.mRNA True 980 mRNA 0.45 4 6422413 6427191

Neighbor

gene id symbol gene type direction distance location
CI01000026_06385815_06391975 NA coding upstream 29911 6385815 ~ 6392502 (+)
CI01000026_06332081_06337355 NA coding upstream 85017 6331739 ~ 6337396 (+)
CI01000026_06234663_06316874 METTL15 coding upstream 105539 6234663 ~ 6316874 (+)
CI01000026_06174460_06187224 NA coding upstream 234937 6173889 ~ 6187476 (+)
CI01000026_06109467_06140429 MYBPC3 coding upstream 280814 6109467 ~ 6141599 (+)
CI01000026_06441927_06455849 NA coding downstream 14323 6441514 ~ 6455922 (+)
CI01000026_06503812_06560355 LGR4 coding downstream 76621 6503812 ~ 6560355 (+)
CI01000026_06640007_06641571 NA coding downstream 212581 6639772 ~ 6641652 (+)
CI01000026_06649589_06653170 NA coding downstream 221985 6649176 ~ 6653431 (+)
CI01000026_06678469_06691173 SLC39A13 coding downstream 251278 6678469 ~ 6692178 (+)
G130343 NA non-coding upstream 2314 6419855 ~ 6420099 (+)
G130330 NA non-coding upstream 16313 6405722 ~ 6406100 (+)
G128708 NA non-coding upstream 222887 6199224 ~ 6199526 (+)
G128622 NA non-coding upstream 273558 6147867 ~ 6148855 (+)
G128619 NA non-coding upstream 336418 6048066 ~ 6085995 (+)
G130357 NA non-coding downstream 9156 6436347 ~ 6436657 (+)
G130390 NA non-coding downstream 54556 6481747 ~ 6482158 (+)
G130394 NA non-coding downstream 57857 6485048 ~ 6485276 (+)
G130395 NA non-coding downstream 58234 6485425 ~ 6485648 (+)
G130402 NA non-coding downstream 63722 6490913 ~ 6536558 (+)
G128757 NA other upstream 95628 6326196 ~ 6326785 (+)
G128601 NA other upstream 430652 5983879 ~ 5991761 (+)
G128585 NA other upstream 472291 5949813 ~ 5950122 (+)
CI01000026_04556074_04556964 FOXB1B, FOXB1, FOXB1A other upstream 1866096 4555776 ~ 4557613 (+)
G128137 NA other upstream 1991212 4430562 ~ 4431201 (+)
G130552 NA other downstream 667862 7095053 ~ 7096652 (+)
G130967 NA other downstream 1761183 8188374 ~ 8189073 (+)
CI01000026_08297901_08307596 CTRB1 other downstream 1871382 8297857 ~ 8307629 (+)
G131077 NA other downstream 2074217 8501408 ~ 8506787 (+)
G132667 NA other downstream 3141548 9568739 ~ 9569160 (+)

Expression


Co-expression Network