CI01000026_06640007_06641571


Basic Information

Item Value
gene id CI01000026_06640007_06641571
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 6639772 ~ 6641652 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_06640007_06641571.mRNA
CTATATAGACAAGTTTATTCATTCTAATTTCTCACATTTCAACTTTTTGTTCATGTTTTCCTGTGCTCTGGGTTAGCTTACACTTTTAATGGTGATTTTCTTTTTCTTTTTCTTTTTAAATTTATTAAGCAGTAAATCACTATAACCGGAAGATGGACACAACATGCAGCACTAATACTTTATCCACTGCAGTACCTGTATTTGATTAGCCGCACACTTTCGCATTGATTCACAGATGAGGATGCGCTTCGTTGTTATGGTGATGCTGTTGCCAGCGCTAATGAGGGCAGGATCAGAATGCAGGTCCAGCTGTCGGCTAACCAATATCTCCATTACCATGGAAAGTGAGGAATGTGGCAGCTGCATCACAATTGACACCACAGCCTGTGCCGGGCTTTGCAAAACACAGGAAAGAGTTTACCGTAGCCCCATGATGCAGAACTACCAGAACACCTGTAACTTCAGAGAATGGACCTACGAGACGTATGAGTTTAAAGGCTGCCCTCCCGGGACTGACTCGGTTTTCACGTACCCTGTGGCCCTCAGCTGTGAGTGCAGCAAGTGTAACTCTGACATCGCAGACTGTGGAGTTCTCAGCCAGCAGACATCCAGCTGCACTGTACATTAGACAAGGAAACCAAACCATTTGAAAGCCTGTCGTACAATTTTGAATATTTCGTTTTTCTTAATTAAATGTAAATTGCATGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_06640007_06641571.mRNA True 709 mRNA 0.43 2 6639772 6641652

Neighbor

gene id symbol gene type direction distance location
CI01000026_06503812_06560355 LGR4 coding upstream 79417 6503812 ~ 6560355 (+)
CI01000026_06441927_06455849 NA coding upstream 183850 6441514 ~ 6455922 (+)
CI01000026_06422488_06426925 NA coding upstream 212581 6422413 ~ 6427191 (+)
CI01000026_06385815_06391975 NA coding upstream 247270 6385815 ~ 6392502 (+)
CI01000026_06332081_06337355 NA coding upstream 302376 6331739 ~ 6337396 (+)
CI01000026_06649589_06653170 NA coding downstream 7524 6649176 ~ 6653431 (+)
CI01000026_06678469_06691173 SLC39A13 coding downstream 36817 6678469 ~ 6692178 (+)
CI01000026_06698615_06712459 NA coding downstream 56572 6698224 ~ 6712852 (+)
CI01000026_06799493_06813865 NA coding downstream 157781 6799433 ~ 6814603 (+)
CI01000026_06878030_06919972 KCNC1, KCNC1A coding downstream 236378 6878030 ~ 6919972 (+)
G130473 NA non-coding upstream 1370 6638079 ~ 6638402 (+)
G130451 NA non-coding upstream 47477 6591992 ~ 6592295 (+)
G130447 NA non-coding upstream 54437 6585073 ~ 6585335 (+)
G130446 NA non-coding upstream 55170 6583523 ~ 6584602 (+)
G130445 NA non-coding upstream 56935 6582627 ~ 6582837 (+)
G130477 NA non-coding downstream 863 6642515 ~ 6642727 (+)
G130478 NA non-coding downstream 1305 6642957 ~ 6643175 (+)
G130483 NA non-coding downstream 80286 6721938 ~ 6722143 (+)
G130490 NA non-coding downstream 103854 6745506 ~ 6746054 (+)
G130491 NA non-coding downstream 104827 6746479 ~ 6746735 (+)
G128757 NA other upstream 312987 6326196 ~ 6326785 (+)
G128601 NA other upstream 648011 5983879 ~ 5991761 (+)
G128585 NA other upstream 689650 5949813 ~ 5950122 (+)
CI01000026_04556074_04556964 FOXB1B, FOXB1, FOXB1A other upstream 2083455 4555776 ~ 4557613 (+)
G128137 NA other upstream 2208571 4430562 ~ 4431201 (+)
G130552 NA other downstream 453401 7095053 ~ 7096652 (+)
G130967 NA other downstream 1546722 8188374 ~ 8189073 (+)
CI01000026_08297901_08307596 CTRB1 other downstream 1656921 8297857 ~ 8307629 (+)
G131077 NA other downstream 1859756 8501408 ~ 8506787 (+)
G132667 NA other downstream 2927087 9568739 ~ 9569160 (+)

Expression


Co-expression Network