CI01000026_06441927_06455849


Basic Information

Item Value
gene id CI01000026_06441927_06455849
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 6441514 ~ 6455922 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_06441927_06455849.mRNA
CTATTTATAATGCTCTTTTAGAATGTTCTTTTAGATGATTGGAATAGTGATCGCTGTGTGCAACCACTCGGCTTCGGAGCAAAAATCTGTGGATGAGTGGATGCATACAAATTCCACTAGCCAATTTCATTGGACATTTTCCTAAGACTCAGAGGTGATTGAGGCTCCCAAGTGAGACCACTAATGTCAGTCAACATAACGTTGAATGTTACTGACAGAAAGGGAACATAACTCCACACTTAACGTATAATGTGCTACGCAGGATGTTTTTTTTTTGTTTGTTTGTTTTTTTTTGCTTGCTTTTAATCAATTAACTATTTGATAAGTTTGGCTCTGAAGACCGCTGCTACATTTCTACAAACAAACACAGTATCTGAGATTATCACAAGAGGGCATATTATATCGTTCACAACATGACCATGCTAAGATCAGAGGTTGGCAGCACATCTGAGACTTTGACTGAACTTGCATCAGCACCAACATCTGCTATGGCAGCTGAAACAAAGGAAATAGTTACACACACTCACACAGTTGTGCTTTCTTCAGATGAAAAAGTCTCACACCCCATGAGCACAGCCCTGCTTCATGCTAGCATAGCAGAAAGCGTAGCTCCATTACACATAAGACTGACAGAGGCAGAGAGAAGACACAGGCATAGCGTCCATTTTGTCCTAAGACACAGGCAGAGTGGCCATCCTGTCCGAAGACACAGGCAGAGTGGCCATCCTGTCCGAAGACACAGGCGGAGCGGAGTGAACAAGGCTAATAAGCTAAACAGGATGTTTAAAAAGACAAAGAGACAAAAAGATTTATCGAGCGCAGCATTAGTTCAGTCAGGCCACGTAGGCATAGTGCTGCGACCAGCTGACGCGGTCAGCTGTCAAATCGCTCCAATCACTACCATTTTCCTATTAGACCGGGAACATATATACATGGCATTACTGCTCGAGAAGGGCATGAAGGATGATTGGCAGCTGCTGAAAAGCTGCATCTAGGGAAATGTTCCTCACTTTTACATTTGGATCCTGGCAGACACTGCAGAAGGCAGATATAATAATGCGGAGAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_06441927_06455849.mRNA True 1068 mRNA 0.43 5 6441514 6455922

Neighbor

gene id symbol gene type direction distance location
CI01000026_06422488_06426925 NA coding upstream 14323 6422413 ~ 6427191 (+)
CI01000026_06385815_06391975 NA coding upstream 49012 6385815 ~ 6392502 (+)
CI01000026_06332081_06337355 NA coding upstream 104118 6331739 ~ 6337396 (+)
CI01000026_06234663_06316874 METTL15 coding upstream 124640 6234663 ~ 6316874 (+)
CI01000026_06174460_06187224 NA coding upstream 254038 6173889 ~ 6187476 (+)
CI01000026_06503812_06560355 LGR4 coding downstream 47890 6503812 ~ 6560355 (+)
CI01000026_06640007_06641571 NA coding downstream 183850 6639772 ~ 6641652 (+)
CI01000026_06649589_06653170 NA coding downstream 193254 6649176 ~ 6653431 (+)
CI01000026_06678469_06691173 SLC39A13 coding downstream 222547 6678469 ~ 6692178 (+)
CI01000026_06698615_06712459 NA coding downstream 242302 6698224 ~ 6712852 (+)
G130357 NA non-coding upstream 4857 6436347 ~ 6436657 (+)
G130343 NA non-coding upstream 21415 6419855 ~ 6420099 (+)
G130330 NA non-coding upstream 35414 6405722 ~ 6406100 (+)
G128708 NA non-coding upstream 241988 6199224 ~ 6199526 (+)
G128622 NA non-coding upstream 292659 6147867 ~ 6148855 (+)
G130390 NA non-coding downstream 25825 6481747 ~ 6482158 (+)
G130394 NA non-coding downstream 29126 6485048 ~ 6485276 (+)
G130395 NA non-coding downstream 29503 6485425 ~ 6485648 (+)
G130402 NA non-coding downstream 34991 6490913 ~ 6536558 (+)
G130434 NA non-coding downstream 114416 6570338 ~ 6570540 (+)
G128757 NA other upstream 114729 6326196 ~ 6326785 (+)
G128601 NA other upstream 449753 5983879 ~ 5991761 (+)
G128585 NA other upstream 491392 5949813 ~ 5950122 (+)
CI01000026_04556074_04556964 FOXB1B, FOXB1, FOXB1A other upstream 1885197 4555776 ~ 4557613 (+)
G128137 NA other upstream 2010313 4430562 ~ 4431201 (+)
G130552 NA other downstream 639131 7095053 ~ 7096652 (+)
G130967 NA other downstream 1732452 8188374 ~ 8189073 (+)
CI01000026_08297901_08307596 CTRB1 other downstream 1842651 8297857 ~ 8307629 (+)
G131077 NA other downstream 2045486 8501408 ~ 8506787 (+)
G132667 NA other downstream 3112817 9568739 ~ 9569160 (+)

Expression


Co-expression Network