G128708


Basic Information

Item Value
gene id G128708
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 6199224 ~ 6199526 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU146236
GGACTGTGGAGTGGCTACAGAAATTGAAATCTACAGGTAATGCTAATACACACTAAATACACATAGTCACACAATGCTGATGTTGTTAACATTAACAATTTGAGAACAAATATAACAATAATAATAATTTGCACAGTTTGACGTGATCCAAGCTAAGCGATCGTTAGATTTAATCACCATTGGCAATGCGATTTATTGTTATGATTTTTCCTCAGTTGTTCGGAACAAAAGTGGCAGACATGTTACTTACTTTTTCAGATGACATTTTCCGGTGAAAATTCTTATTTTGGTCATACTTCCAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU146236 True 303 lncRNA 0.34 1 6199224 6199526

Neighbor

gene id symbol gene type direction distance location
CI01000026_06174460_06187224 NA coding upstream 11748 6173889 ~ 6187476 (+)
CI01000026_06109467_06140429 MYBPC3 coding upstream 57625 6109467 ~ 6141599 (+)
CI01000026_05828041_05831860 NA coding upstream 367215 5828041 ~ 5832009 (+)
CI01000026_05820062_05827011 NA coding upstream 371799 5820062 ~ 5827425 (+)
CI01000026_05809690_05817205 NA coding upstream 381751 5809690 ~ 5817473 (+)
CI01000026_06234663_06316874 METTL15 coding downstream 35137 6234663 ~ 6316874 (+)
CI01000026_06332081_06337355 NA coding downstream 132213 6331739 ~ 6337396 (+)
CI01000026_06385815_06391975 NA coding downstream 186289 6385815 ~ 6392502 (+)
CI01000026_06422488_06426925 NA coding downstream 222887 6422413 ~ 6427191 (+)
CI01000026_06441927_06455849 NA coding downstream 241988 6441514 ~ 6455922 (+)
G128622 NA non-coding upstream 50369 6147867 ~ 6148855 (+)
G128619 NA non-coding upstream 113229 6048066 ~ 6085995 (+)
G128620 NA non-coding upstream 128924 6069209 ~ 6070300 (+)
G128654 NA non-coding upstream 146899 6051870 ~ 6052325 (+)
G128647 NA non-coding upstream 154908 6039340 ~ 6044316 (+)
G130330 NA non-coding downstream 206196 6405722 ~ 6406100 (+)
G130343 NA non-coding downstream 220329 6419855 ~ 6420099 (+)
G130357 NA non-coding downstream 236821 6436347 ~ 6436657 (+)
G130390 NA non-coding downstream 282221 6481747 ~ 6482158 (+)
G130394 NA non-coding downstream 285522 6485048 ~ 6485276 (+)
G128601 NA other upstream 207463 5983879 ~ 5991761 (+)
G128585 NA other upstream 249102 5949813 ~ 5950122 (+)
CI01000026_04556074_04556964 FOXB1B, FOXB1, FOXB1A other upstream 1642907 4555776 ~ 4557613 (+)
G128137 NA other upstream 1768023 4430562 ~ 4431201 (+)
CI01000026_04327206_04331151 DOK4, DOK5 other upstream 1867139 4327206 ~ 4332085 (+)
G128757 NA other downstream 126670 6326196 ~ 6326785 (+)
G130552 NA other downstream 895527 7095053 ~ 7096652 (+)
G130967 NA other downstream 1988848 8188374 ~ 8189073 (+)
CI01000026_08297901_08307596 CTRB1 other downstream 2099047 8297857 ~ 8307629 (+)
G131077 NA other downstream 2301882 8501408 ~ 8506787 (+)

Expression


Co-expression Network