CI01000026_06385815_06391975


Basic Information

Item Value
gene id CI01000026_06385815_06391975
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 6385815 ~ 6392502 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_06385815_06391975.mRNA
ATGACTTTATCTTTACCTCCCCCTGAGCCATTTCTGCCCCACGTTGGTGAACCTGTCGTGCCGTGGGAGCGCTGCGCACGAGTCAGAGAGAGACTGCTTATTGAAGATGATAAACTTACACTGGATAAGGCTGTCACTCTGGCACTCCAAATTGAAGAAGCTACTCAATGTGCAGCTAAAATAGCGGAGAATAATGCAGCTAAAACTGATTTCACCTCTGTACCCGCAAATGCAGTCACCGATGAGGGGCTCCAGACTGCAGGTGCAATCACCCAGCAAACACAGCCTCAATCAAGTCAACAGAGACAGAAGTGTGGAAACTGTGGCTCCAATCGCCATGCCAACAGGTCCCCAGACTGCCCAGCTATCGGCCGTAAACTGAAAAACTGTTGCATCCCACTGCTTCTTGACACAGGAGCTAAAGTGGCATTGCTTAATATGGCCACCTACAAGAAATTTTTCTCTGAAGTTACAACCATCACCTTTGAAACTCTGTGGCCACTTCGAAGAGTGCCTCTTGCAATGCGTGACAAGGTCACTACTGAACTGCAGGGCATGCTAACAGCAGATCTCATTGATCCCATTGATGCCTCTCCTTGGGTCTCAAATCTTGTGATTGTGCAAAAACGGTCAGGGGGCATACATCTCTGTGTTGACCTTCGGGGGCCTAATAAGGCAGTGGTGCCAGACAAATACCCGCTGCCAACAATTGAGGAACTTACCACACTTTTCCATGGCTCCTCAGTGTTCACAAAGCTGGATCTAAAGCAAGGTTACATGCAGATACCCCTGCACAAAGACAGTAGAAACCTGACTGCATTCGTGACTCACATGGGGGTGTTCCGCTTCAAGAGGATTCCTTTTGGCCTTAGTTCAGCACCTAGCTGCTTTCAGAAAATCATGGCCACTGTCCTAGCAGGGCTCCCGGGTACGGCCGTGTACTTAGATGATATTGTTGTACATGGAAAGGATGTGGCCACTTATGATGACTGCCTGAGACGGGTGTTCACAGCTCTGTCTAGACACAATCTGACATTGAATGCAGATAAATGTGTGTTTGCAGCCCTAGCAATAGACTTTGTTGGTCTTCGAGTGTCCAGCTCGGGTATCACACCACTGCAGTCCAACGTAGAGGCCATCCTCAACCTTCCCGTGCCAACATCGGCTGGAAAGCTTGCATCCTTCCTTGGCATGACTGCTTACTATCTCAGATTCTTACCTCAGTATTCTGCAATCACTGTCCCCCTGCGACAGCTGCTCAAACATAACACCTCCTGGGCATGGACAGCAGAGTGCGAACATGCTATTCAACAGCTCAAGCACCACCTCACTTCACCACCTACACTAGCTCATTTTAATCTCTCCAGTCCCACCCCAGTGACATGTGAACCATCAGAAGTGGCAGTTGGAGCAGTCCTGTCACAGATGCATGGCGGCATTGAAAGGTCTATTGCATTTGCTTCACGGGCTCTGAGTACAGCTGAGCAGAAGTACTCAGTGGGAGAGAGAGAGGCACTGGCGTGCATTTGGGCATGTGAGCGCTGGCACATGTACTTTTATGGACAATCCTTTACACTAGAACAGACCGCCAGGCGCTTACTGCCCTCATGTCCTCTGCGGGAACTGGCCACAAGCCAATCAGACTCCACCGATGGGCTGACAGATTTACTGTCACGTTCAACTGTGGAGTCAACCAGCACAGTCAGGCAGCCAGAGTCAGACATAGAGAGTGACCTTGTGCAGTTAGTGTATGAGCCCTTACGATCATCAGTGTCTCTTGAAGAGCTTCAGCGAGAGTCTGCAGCAGACCCACTCTTCATTACTCTCAGCACCTACATACGAGAGAGGGCAAAACAGAACATCTGGAAAACAGGAACTCCAGCCCTGCCACCCTTGCAGCCTGTCGACTGGCCCGCCAAGCCATGGGAGCATCTCCAGATGGACATCTGTGGAGAGCTCGTCTCTGTTCCGCACCATCAGCGATTCCTAGTCGTGGTATATGACCTCCACTCGAAGTGGCCTGAGGTTGTGCCTATGGGCTCAGTTACAGCCTCTGTAATGATTGATTTCCTGGAGCAGCTCTTTTCCCGTTGGGGCATCCCGCGTGCCATTACCACAGATAATGGGCCGCAGTTCATTTTCAGCGAGTTTTCATCCTATCTGTCGGCCAAGGGAATAGCTTACATATGTACTGCCTACTACCATCCCCAAGCTAATGGTGGTGTGGAAAGATTTAACCAAAGTCTGAAAAATGGTATACGCGCACACCTTGCCCAAGGATTTCCATTTAAGGCTGCTCTCTCCCAGACACTCTTGCTCTTGCCACTCAGCATGCCACTACAGGAGTCAAATGGGCCAGTCACTTTTGAGCTTGCTAATGGATCCCGCTGGCATGCCAGTTGTCTTCGAAGAGTGCCCACACCTTCCGCTGTGGAGGAAAGCCTAAACCGATCTATGGTCATGGACTCCATTCTGCCCCCACCGAATCTGGATTCTGGTGAAGTAATCAGACAGGAAGTGGGAACTGATCACTGTCAAAGTCCACAATCTGCAGATGCCCCTGTGTCAACTCGCTCTGTGAGAACGAGGTTACCTTTTGGAAAAACACTTTTTAGCACACTAGTCAGACAGCAGCATTTAAACATTGCCAAGGGTGTTTATGCATTTCAGAAGCAGAAAAATGTGAAAATGCATGAAAGCAGAAGTTGTGCTCTATAAATAGACAATTAGCCAGTGAGTAAAACTGTATTTTGCACAGGTTCTCTTCATCCACAAATACTACAATTGTGCCCTGCATACATTTTTTTAATTTATTTTATCCTGAGTTTGTTCTTGGAAATCATAGAAAACAATGTCTAGGTAAATCATGATTTTCACAAAGCCATACCTACCTAGCATCAAATCCTGGCCAACAGAACAAGATGAGGTTCAATGGAACTCATTTGCATTGTATCGGTCAATTATATTAAGACCCTGCCCACTCAGCCTCCTGCAGATGTGGACCAGTCAGCCCCATGGGAAAGATCATCATATATAGTGTTTTTGTAATAATTGCAGCAGTTGCATAGTGAATTGCAGTGCCGCTATATCACAAAGCTAAGATTTGAGCGTAATTAGTTAGAGACTTACATTCATTCCACAAAGCCCATTTCTTAACGCTGATGCGGAGCATTTTCTAAATGAAGATGAGTCATACTCTGATTCATGGGCTCAGGGGACCATCGTAGTCCAAAGGTAAAGTTGAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_06385815_06391975.mRNA True 3245 mRNA 0.48 8 6385815 6392502

Neighbor

gene id symbol gene type direction distance location
CI01000026_06332081_06337355 NA coding upstream 48419 6331739 ~ 6337396 (+)
CI01000026_06234663_06316874 METTL15 coding upstream 68941 6234663 ~ 6316874 (+)
CI01000026_06174460_06187224 NA coding upstream 198339 6173889 ~ 6187476 (+)
CI01000026_06109467_06140429 MYBPC3 coding upstream 244216 6109467 ~ 6141599 (+)
CI01000026_05828041_05831860 NA coding upstream 553806 5828041 ~ 5832009 (+)
CI01000026_06422488_06426925 NA coding downstream 29911 6422413 ~ 6427191 (+)
CI01000026_06441927_06455849 NA coding downstream 49012 6441514 ~ 6455922 (+)
CI01000026_06503812_06560355 LGR4 coding downstream 111310 6503812 ~ 6560355 (+)
CI01000026_06640007_06641571 NA coding downstream 247270 6639772 ~ 6641652 (+)
CI01000026_06649589_06653170 NA coding downstream 256674 6649176 ~ 6653431 (+)
G128708 NA non-coding upstream 186289 6199224 ~ 6199526 (+)
G128622 NA non-coding upstream 236960 6147867 ~ 6148855 (+)
G128619 NA non-coding upstream 299820 6048066 ~ 6085995 (+)
G130330 NA non-coding downstream 13220 6405722 ~ 6406100 (+)
G130343 NA non-coding downstream 27353 6419855 ~ 6420099 (+)
G130357 NA non-coding downstream 43845 6436347 ~ 6436657 (+)
G130390 NA non-coding downstream 89245 6481747 ~ 6482158 (+)
G130394 NA non-coding downstream 92546 6485048 ~ 6485276 (+)
G128757 NA other upstream 59030 6326196 ~ 6326785 (+)
G128601 NA other upstream 394054 5983879 ~ 5991761 (+)
G128585 NA other upstream 435693 5949813 ~ 5950122 (+)
CI01000026_04556074_04556964 FOXB1B, FOXB1, FOXB1A other upstream 1829498 4555776 ~ 4557613 (+)
G128137 NA other upstream 1954614 4430562 ~ 4431201 (+)
G130552 NA other downstream 702551 7095053 ~ 7096652 (+)
G130967 NA other downstream 1795872 8188374 ~ 8189073 (+)
CI01000026_08297901_08307596 CTRB1 other downstream 1906071 8297857 ~ 8307629 (+)
G131077 NA other downstream 2108906 8501408 ~ 8506787 (+)
G132667 NA other downstream 3176237 9568739 ~ 9569160 (+)

Expression


Co-expression Network