G130473


Basic Information

Item Value
gene id G130473
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 6638079 ~ 6638402 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU148352
ATATATATATATATACACATACACACACACACACACACACACACACAGTGCAGTTTATTTGTCAGGTGTGGTTGCAATAATGATGATGAGAAATATGAGAAATATAAAAAAAAAAACAGTCTTTGATAAATCTAAGGAACATGCAGGAGATAATAATAACAGCACAACAATGAAACCAAACAAAAAACTGGAAGAACTGAGGGCTTAAATACACAAGGGAGGATAATCAACAGAACAGGGAACAGGTGTGTAACTAAATTAACAACCACGGAAACTAACAATGACCAGATACACAGGCAAAACGGAAACAGGGAAAACAAAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU148352 True 324 lncRNA 0.35 1 6638079 6638402

Neighbor

gene id symbol gene type direction distance location
CI01000026_06503812_06560355 LGR4 coding upstream 77724 6503812 ~ 6560355 (+)
CI01000026_06441927_06455849 NA coding upstream 182157 6441514 ~ 6455922 (+)
CI01000026_06422488_06426925 NA coding upstream 210888 6422413 ~ 6427191 (+)
CI01000026_06385815_06391975 NA coding upstream 245577 6385815 ~ 6392502 (+)
CI01000026_06332081_06337355 NA coding upstream 300683 6331739 ~ 6337396 (+)
CI01000026_06640007_06641571 NA coding downstream 1370 6639772 ~ 6641652 (+)
CI01000026_06649589_06653170 NA coding downstream 10774 6649176 ~ 6653431 (+)
CI01000026_06678469_06691173 SLC39A13 coding downstream 40067 6678469 ~ 6692178 (+)
CI01000026_06698615_06712459 NA coding downstream 59822 6698224 ~ 6712852 (+)
CI01000026_06799493_06813865 NA coding downstream 161031 6799433 ~ 6814603 (+)
G130451 NA non-coding upstream 45784 6591992 ~ 6592295 (+)
G130447 NA non-coding upstream 52744 6585073 ~ 6585335 (+)
G130446 NA non-coding upstream 53477 6583523 ~ 6584602 (+)
G130445 NA non-coding upstream 55242 6582627 ~ 6582837 (+)
G130444 NA non-coding upstream 55518 6582197 ~ 6582561 (+)
G130477 NA non-coding downstream 4113 6642515 ~ 6642727 (+)
G130478 NA non-coding downstream 4555 6642957 ~ 6643175 (+)
G130483 NA non-coding downstream 83536 6721938 ~ 6722143 (+)
G130490 NA non-coding downstream 107104 6745506 ~ 6746054 (+)
G130491 NA non-coding downstream 108077 6746479 ~ 6746735 (+)
G128757 NA other upstream 311294 6326196 ~ 6326785 (+)
G128601 NA other upstream 646318 5983879 ~ 5991761 (+)
G128585 NA other upstream 687957 5949813 ~ 5950122 (+)
CI01000026_04556074_04556964 FOXB1B, FOXB1, FOXB1A other upstream 2081762 4555776 ~ 4557613 (+)
G128137 NA other upstream 2206878 4430562 ~ 4431201 (+)
G130552 NA other downstream 456651 7095053 ~ 7096652 (+)
G130967 NA other downstream 1549972 8188374 ~ 8189073 (+)
CI01000026_08297901_08307596 CTRB1 other downstream 1660171 8297857 ~ 8307629 (+)
G131077 NA other downstream 1863006 8501408 ~ 8506787 (+)
G132667 NA other downstream 2930337 9568739 ~ 9569160 (+)

Expression


Co-expression Network