G128637


Basic Information

Item Value
gene id G128637
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 6020766 ~ 6021071 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU146148
GATTCAAAAGTTATCCATGGATAACGCGATGGTGTATTGCGTGTGTTTAAATATATTTGTTTAGCAGACCATTGATAGCTTGCAGTCGTCACTCTATCTCCGCTCACAACGACACGCCTCCAGGCACTCGGCTGTTTTCGGAAAGACTCGGTACAGCGTATGTATCTTTTATAAATATGATAAAACTAAAGACTTTTCGGCGGTATGAAGGATGCTATACTACTCTATAGGTACTTAAGATTAACATGAGACTGGCAGAAACTGTGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU146148 True 268 lncRNA 0.41 2 6020766 6021071

Neighbor

gene id symbol gene type direction distance location
CI01000026_05828041_05831860 NA coding upstream 188757 5828041 ~ 5832009 (+)
CI01000026_05820062_05827011 NA coding upstream 193341 5820062 ~ 5827425 (+)
CI01000026_05809690_05817205 NA coding upstream 203293 5809690 ~ 5817473 (+)
CI01000026_05793556_05805041 CTDSPL2B coding upstream 215641 5793556 ~ 5805125 (+)
CI01000026_05771496_05786357 CASC4 coding upstream 234409 5771496 ~ 5786357 (+)
CI01000026_06109467_06140429 MYBPC3 coding downstream 88396 6109467 ~ 6141599 (+)
CI01000026_06174460_06187224 NA coding downstream 152818 6173889 ~ 6187476 (+)
CI01000026_06234663_06316874 METTL15 coding downstream 213592 6234663 ~ 6316874 (+)
CI01000026_06332081_06337355 NA coding downstream 310668 6331739 ~ 6337396 (+)
CI01000026_06385815_06391975 NA coding downstream 364744 6385815 ~ 6392502 (+)
G128591 NA non-coding upstream 52662 5967772 ~ 5968104 (+)
G128590 NA non-coding upstream 54226 5966215 ~ 5966540 (+)
G128588 NA non-coding upstream 62652 5957901 ~ 5958114 (+)
G128587 NA non-coding upstream 67036 5953432 ~ 5953730 (+)
G128586 NA non-coding upstream 67555 5952912 ~ 5953211 (+)
G128646 NA non-coding downstream 12958 6034029 ~ 6039053 (+)
G128647 NA non-coding downstream 18269 6039340 ~ 6044316 (+)
G128619 NA non-coding downstream 26995 6048066 ~ 6085995 (+)
G128654 NA non-coding downstream 30799 6051870 ~ 6052325 (+)
G128620 NA non-coding downstream 48138 6069209 ~ 6070300 (+)
G128601 NA other upstream 29005 5983879 ~ 5991761 (+)
G128585 NA other upstream 70644 5949813 ~ 5950122 (+)
CI01000026_04556074_04556964 FOXB1B, FOXB1, FOXB1A other upstream 1464449 4555776 ~ 4557613 (+)
G128137 NA other upstream 1589565 4430562 ~ 4431201 (+)
CI01000026_04327206_04331151 DOK4, DOK5 other upstream 1688681 4327206 ~ 4332085 (+)
G128757 NA other downstream 305125 6326196 ~ 6326785 (+)
G130552 NA other downstream 1073982 7095053 ~ 7096652 (+)
G130967 NA other downstream 2167303 8188374 ~ 8189073 (+)
CI01000026_08297901_08307596 CTRB1 other downstream 2277502 8297857 ~ 8307629 (+)
G131077 NA other downstream 2480337 8501408 ~ 8506787 (+)

Expression


Co-expression Network