G128586


Basic Information

Item Value
gene id G128586
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 5952912 ~ 5953211 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU146090
CACGACCGGGAGCGCCACAGCAGCACACAAAAGGCAGACTGGATCCTACAAGCCAATTTATCTTCAGAAATAGAAGGAGCCCATTGTCCATATATCAAATGGCCTGTCCCAGCCCCCTGTGTCCCTCATGTTCAGTTCATCCAAAGTTAATGTAGCCTGAGTCTACACCATGCCGTGCTTTAACACTGTGCGCTCTGTGAAAGACTCTGCAAATGAGCTGGCAGTGGCTTCTATCAAACTCACTTTAGCTTCTCGGGACAATCTAACAGCACCAATATCTGCTGGCAGTGGTGTATCTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU146090 True 300 lncRNA 0.49 1 5952912 5953211

Neighbor

gene id symbol gene type direction distance location
CI01000026_05828041_05831860 NA coding upstream 120903 5828041 ~ 5832009 (+)
CI01000026_05820062_05827011 NA coding upstream 125487 5820062 ~ 5827425 (+)
CI01000026_05809690_05817205 NA coding upstream 135439 5809690 ~ 5817473 (+)
CI01000026_05793556_05805041 CTDSPL2B coding upstream 147787 5793556 ~ 5805125 (+)
CI01000026_05771496_05786357 CASC4 coding upstream 166555 5771496 ~ 5786357 (+)
CI01000026_06109467_06140429 MYBPC3 coding downstream 156256 6109467 ~ 6141599 (+)
CI01000026_06174460_06187224 NA coding downstream 220678 6173889 ~ 6187476 (+)
CI01000026_06234663_06316874 METTL15 coding downstream 281452 6234663 ~ 6316874 (+)
CI01000026_06332081_06337355 NA coding downstream 378528 6331739 ~ 6337396 (+)
CI01000026_06385815_06391975 NA coding downstream 432604 6385815 ~ 6392502 (+)
G128584 NA non-coding upstream 4855 5947844 ~ 5948057 (+)
G128582 NA non-coding upstream 11707 5940965 ~ 5941205 (+)
G128581 NA non-coding upstream 12223 5940376 ~ 5940689 (+)
G128580 NA non-coding upstream 17281 5935381 ~ 5935631 (+)
G128578 NA non-coding upstream 22078 5930515 ~ 5930834 (+)
G128587 NA non-coding downstream 221 5953432 ~ 5953730 (+)
G128588 NA non-coding downstream 4690 5957901 ~ 5958114 (+)
G128590 NA non-coding downstream 13004 5966215 ~ 5966540 (+)
G128591 NA non-coding downstream 14561 5967772 ~ 5968104 (+)
G128637 NA non-coding downstream 67555 6020766 ~ 6021071 (+)
G128585 NA other upstream 2790 5949813 ~ 5950122 (+)
CI01000026_04556074_04556964 FOXB1B, FOXB1, FOXB1A other upstream 1396595 4555776 ~ 4557613 (+)
G128137 NA other upstream 1521711 4430562 ~ 4431201 (+)
CI01000026_04327206_04331151 DOK4, DOK5 other upstream 1620827 4327206 ~ 4332085 (+)
G127979 NA other upstream 2189926 3752551 ~ 3762986 (+)
G128601 NA other downstream 30668 5983879 ~ 5991761 (+)
G128757 NA other downstream 372985 6326196 ~ 6326785 (+)
G130552 NA other downstream 1141842 7095053 ~ 7096652 (+)
G130967 NA other downstream 2235163 8188374 ~ 8189073 (+)
CI01000026_08297901_08307596 CTRB1 other downstream 2345362 8297857 ~ 8307629 (+)

Expression


Co-expression Network