G131872


Basic Information

Item Value
gene id G131872
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 8573471 ~ 8573841 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU149992
CTTGAACGACTGCGGGTCTATGAGCCATTGCGATACATCCACTGTCAACATCAGCGCATGGTAGCGTGGCCGCAAGCTGGTTAAGACCACACCCACCCTCCACCTTGCCCCGCCTCTCTCCTCCTCATTAGCATTTAAAGCTACAGACCCAGAAATGGCACATCCTGAGGAAAGCTCATTGTGGGACTGTCTCATAGTGGCTGAAATTCTGCACCAAGGCTGAATTTCGGGAAAAAGACTTCAGATACAGTACTAGGGACCACTTAGGCCTATATAAAAGCATCCAAAAAGTAGCATGTCATGGGACCTTTAAGTTACACAAACATATATAAATATGGAATAAATTAAATAAATAAAAAAATATATATAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU149992 True 371 lncRNA 0.43 1 8573471 8573841

Neighbor

gene id symbol gene type direction distance location
CI01000026_08474877_08483134 NA coding upstream 90203 8474877 ~ 8483268 (+)
CI01000026_08454661_08461606 NA coding upstream 111550 8454661 ~ 8461921 (+)
CI01000026_08447474_08449558 TPPP3 coding upstream 122860 8447396 ~ 8450611 (+)
CI01000026_08421799_08434134 ZDHHC1 coding upstream 139278 8421683 ~ 8434193 (+)
CI01000026_08313929_08318869 ATP6V0D1, ATP6V0D1.L coding upstream 254580 8311795 ~ 8318891 (+)
CI01000026_08944583_08947981 NA coding downstream 370685 8944526 ~ 8947993 (+)
CI01000026_08950735_08960908 NA coding downstream 376822 8950663 ~ 8961146 (+)
CI01000026_09076625_09079154 IRX3A, IRX3 coding downstream 501375 9075216 ~ 9079338 (+)
CI01000026_09175446_09178464 NA coding downstream 601408 9175249 ~ 9178488 (+)
CI01000026_09339450_09352303 AKTIP coding downstream 765609 9339450 ~ 9353177 (+)
G131861 NA non-coding upstream 940 8572298 ~ 8572531 (+)
G131859 NA non-coding upstream 2139 8571102 ~ 8571332 (+)
G131108 NA non-coding upstream 52029 8520774 ~ 8521442 (+)
G131071 NA non-coding upstream 75479 8486471 ~ 8497992 (+)
G131098 NA non-coding upstream 119231 8454013 ~ 8454240 (+)
G131873 NA non-coding downstream 283 8574124 ~ 8574323 (+)
G131875 NA non-coding downstream 4645 8578486 ~ 8578716 (+)
G131877 NA non-coding downstream 9893 8583734 ~ 8584115 (+)
G131878 NA non-coding downstream 10871 8584712 ~ 8584943 (+)
G131890 NA non-coding downstream 86196 8660037 ~ 8660350 (+)
G131077 NA other upstream 66684 8501408 ~ 8506787 (+)
CI01000026_08297901_08307596 CTRB1 other upstream 274057 8297857 ~ 8307629 (+)
G130967 NA other upstream 384398 8188374 ~ 8189073 (+)
G130552 NA other upstream 1476819 7095053 ~ 7096652 (+)
G128757 NA other upstream 2246686 6326196 ~ 6326785 (+)
G132667 NA other downstream 994898 9568739 ~ 9569160 (+)
G133192 NA other downstream 1585978 10159819 ~ 10161961 (+)
CI01000026_11075931_11078249 MDK, MDKA other downstream 2496927 11075784 ~ 11079080 (+)
CI01000026_11241496_11246081 NA other downstream 2671092 11241496 ~ 11246204 (+)
G133542 NA other downstream 2902276 11476117 ~ 11477544 (+)

Expression


Co-expression Network